RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 SLC35E3Q7Z769 313 aa20.37■□□□□ 0.85
U2AF1-208ENST00000471250 FUT9Q9Y231 359 aa20.37■□□□□ 0.85
U2AF1-208ENST00000471250 IGHV4-59P01825 116 aa20.36■□□□□ 0.85
U2AF1-208ENST00000471250 PPT1P50897 306 aa20.36■□□□□ 0.85
U2AF1-208ENST00000471250 FAM78BQ5VT40 261 aa20.36■□□□□ 0.85
U2AF1-208ENST00000471250 RBMS3Q6XE24 437 aaKnown RBP20.36■□□□□ 0.85
U2AF1-208ENST00000471250 GATAD1Q8WUU5 269 aa20.36■□□□□ 0.85
U2AF1-208ENST00000471250 GSX1Q9H4S2 264 aaPredicted RBP20.36■□□□□ 0.85
U2AF1-208ENST00000471250 CARHSP1Q9Y2V2 147 aaKnown RBP20.36■□□□□ 0.85
U2AF1-208ENST00000471250 PDZD2O15018 2839 aa20.36■□□□□ 0.85
U2AF1-208ENST00000471250 G3V318 75 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 NDUFB8O95169 186 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 APOC3P02656 99 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 HSPB1P04792 205 aaKnown RBP20.35■□□□□ 0.85
U2AF1-208ENST00000471250 C19orf54Q5BKX5 351 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 OR1L4Q8NGR5 311 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 OR5R1Q8NH85 324 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 RXFP4Q8TDU9 374 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 TMEM37Q8WXS4 190 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 RNF2Q99496 336 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 SLC35B3Q9H1N7 401 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 OR2J3O76001 311 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 CXorf1O96002 111 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 IGHG2P01859 326 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 PSMB3P49720 205 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 C9orf152Q5JTZ5 239 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 Q6YL49 198 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 MIR17HGQ75NE6 70 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 ZNF48Q96MX3 618 aaPredicted RBP20.35■□□□□ 0.85
U2AF1-208ENST00000471250 DNAJC4Q9NNZ3 241 aa20.35■□□□□ 0.85
U2AF1-208ENST00000471250 MAP1AP78559 2803 aaPredicted RBP20.34■□□□□ 0.85
U2AF1-208ENST00000471250 NPBWR1P48145 328 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 MFAP4P55083 255 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 CCDC28AQ8IWP9 274 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 TEX29Q8N6K0 151 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 PFDN5Q99471 154 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 MRPL32Q9BYC8 188 aaKnown RBP20.34■□□□□ 0.85
U2AF1-208ENST00000471250 PRDM13Q9H4Q3 707 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 MANBALQ9NQG1 85 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 VAX2Q9UIW0 290 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 FBXL7Q9UJT9 491 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 SVEP1Q4LDE5 3571 aa20.34■□□□□ 0.85
U2AF1-208ENST00000471250 GCN1Q92616 2671 aaKnown RBP20.34■□□□□ 0.85
U2AF1-208ENST00000471250 TRAV41A0A0B4J266 112 aa20.33■□□□□ 0.85
U2AF1-208ENST00000471250 IGF1P05019 195 aa20.33■□□□□ 0.85
U2AF1-208ENST00000471250 SRP19P09132 144 aaKnown RBP20.33■□□□□ 0.85
U2AF1-208ENST00000471250 ARL14EPLP0DKL9 152 aa20.33■□□□□ 0.85
U2AF1-208ENST00000471250 TRBV9A0A0B4J1U6 114 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 COX7A2P2O60397 106 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 TAGLN2P37802 199 aaKnown RBP20.32■□□□□ 0.84
U2AF1-208ENST00000471250 TIGITQ495A1 244 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 PATE2Q6UY27 113 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 SPNS3Q6ZMD2 512 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 IQCF2Q8IXL9 164 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 C21orf62Q9NYP8 219 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 CSPG4Q6UVK1 2322 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 TRAV30A0A087WSZ9 112 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 IGKV1-17P01599 117 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 PLP1P60201 277 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 BLCAPP62952 87 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 VN1R17PQ8TDU5 208 aa20.32■□□□□ 0.84
U2AF1-208ENST00000471250 TECRQ9NZ01 308 aaKnown RBP20.32■□□□□ 0.84
U2AF1-208ENST00000471250 C10orf113Q5VZT2 155 aa20.31■□□□□ 0.84
U2AF1-208ENST00000471250 DOK5Q9P104 306 aa20.31■□□□□ 0.84
U2AF1-208ENST00000471250 S4R3C0 116 aa20.31■□□□□ 0.84
U2AF1-208ENST00000471250 ELOA3CA0A087WX78 387 aaPredicted RBP20.3■□□□□ 0.84
U2AF1-208ENST00000471250 F8W735 103 aaPredicted RBP20.3■□□□□ 0.84
U2AF1-208ENST00000471250 FABP1P07148 127 aa20.3■□□□□ 0.84
U2AF1-208ENST00000471250 TXN2Q99757 166 aa20.3■□□□□ 0.84
U2AF1-208ENST00000471250 ZNF355PQ9NSJ1 428 aa20.3■□□□□ 0.84
U2AF1-208ENST00000471250 GNG7O60262 68 aa20.29■□□□□ 0.84
U2AF1-208ENST00000471250 GCHFRP30047 84 aa20.29■□□□□ 0.84
U2AF1-208ENST00000471250 FCGR2BP31994 310 aaPredicted RBP20.29■□□□□ 0.84
U2AF1-208ENST00000471250 TAS2R45P59539 299 aa20.29■□□□□ 0.84
U2AF1-208ENST00000471250 DEFA5Q01523 94 aa20.29■□□□□ 0.84
U2AF1-208ENST00000471250 KRTAP1-1Q07627 177 aa20.29■□□□□ 0.84
U2AF1-208ENST00000471250 CD5LO43866 347 aa20.29■□□□□ 0.84
U2AF1-208ENST00000471250 C8orf88P0DMB2 117 aa20.29■□□□□ 0.84
U2AF1-208ENST00000471250 PSG1P11464 419 aa20.29■□□□□ 0.84
U2AF1-208ENST00000471250 RHOGP84095 191 aa20.29■□□□□ 0.84
U2AF1-208ENST00000471250 PAGE4O60829 102 aa20.28■□□□□ 0.84
U2AF1-208ENST00000471250 GUCA2BQ16661 112 aa20.28■□□□□ 0.84
U2AF1-208ENST00000471250 Q56UQ5 140 aa20.28■□□□□ 0.84
U2AF1-208ENST00000471250 SVBPQ8N300 66 aa20.28■□□□□ 0.84
U2AF1-208ENST00000471250 NECAP1Q8NC96 275 aa20.28■□□□□ 0.84
U2AF1-208ENST00000471250 OR1B1Q8NGR6 318 aa20.28■□□□□ 0.84
U2AF1-208ENST00000471250 LINC00527Q9UJ94 153 aa20.28■□□□□ 0.84
U2AF1-208ENST00000471250 VPREB3Q9UKI3 123 aa20.28■□□□□ 0.84
U2AF1-208ENST00000471250 CREBBPQ92793 2442 aa20.27■□□□□ 0.84
U2AF1-208ENST00000471250 CELSR1Q9NYQ6 3014 aa20.27■□□□□ 0.84
U2AF1-208ENST00000471250 NDUFS6O75380 124 aaKnown RBP20.27■□□□□ 0.84
U2AF1-208ENST00000471250 HYPMO75409 117 aa20.27■□□□□ 0.84
U2AF1-208ENST00000471250 TOMM40O96008 361 aa20.27■□□□□ 0.84
U2AF1-208ENST00000471250 RD3LP0DJH9 198 aa20.27■□□□□ 0.84
U2AF1-208ENST00000471250 ORM2P19652 201 aa20.27■□□□□ 0.84
U2AF1-208ENST00000471250 YPEL3P61236 119 aaPredicted RBP20.27■□□□□ 0.84
U2AF1-208ENST00000471250 MEF2BQ02080 365 aaPredicted RBP20.27■□□□□ 0.84
U2AF1-208ENST00000471250 PQLC2Q6ZP29 291 aa20.27■□□□□ 0.84
U2AF1-208ENST00000471250 Q6ZS46 218 aa20.27■□□□□ 0.84
U2AF1-208ENST00000471250 C15orf32Q32M92 178 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms