RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 PBOV1Q9GZY1 135 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 OR51V1Q9H2C8 321 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 IFI27L2Q9H2X8 130 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 SAV1Q9H4B6 383 aaPredicted RBP3.58□□□□□ -1.84
CKS1B-204ENST00000471245 ABCB9Q9NP78 766 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 RASL12Q9NYN1 266 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 DNAH11Q96DT5 4516 aa3.58□□□□□ -1.84
CKS1B-204ENST00000471245 H3BSH0 61 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 M0QZK8 103 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 NRASP01111 189 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 APOC1P02654 83 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 OR5AL1P0C617 328 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 CD37P11049 281 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 RAB3AP20336 220 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 IFNGR2P38484 337 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 EDDM3BP56851 147 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 PKD1P98161 4303 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 DIAPH2-AS1Q14236 149 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 EDDM3AQ14507 147 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 SNCBQ16143 134 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 PLEKHG7Q6ZR37 379 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 DRAM1Q8N682 238 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF676Q8N7Q3 588 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 C5orf56Q8N8D9 126 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 NECAP1Q8NC96 275 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF738Q8NE65 137 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 OR11H1Q8NG94 326 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF714Q96N38 554 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF251Q9BRH9 671 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 TMEM133Q9H2Q1 129 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF286AQ9HBT8 521 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 SDHAF2Q9NX18 166 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 BAIAP2Q9UQB8 552 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 SLC22A13Q9Y226 551 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 LINC00312Q9Y6C7 94 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 HSPE1-MOB4S4R3N1 261 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 V9GYS6 101 aa3.57□□□□□ -1.84
CKS1B-204ENST00000471245 TMEM269A0A1B0GVZ9 245 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 RIIAD1A6NNX1 92 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 M0QXV9 152 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 DHRS3O75911 302 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 IFNGP01579 166 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 IGHG2P01859 326 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 IFNA6P05013 189 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 EIF4EP06730 217 aaKnown RBP3.56□□□□□ -1.84
CKS1B-204ENST00000471245 MRPL3P09001 348 aaKnown RBP3.56□□□□□ -1.84
CKS1B-204ENST00000471245 CD3GP09693 182 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 CGB3P0DN86 165 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 CGB7P0DN87 165 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 CDK2P24941 298 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 CNTFRP26992 372 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 CD34P28906 385 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 RANBP1P43487 201 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 RAB7AP51149 207 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 BLVRAP53004 296 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 CTAG1AP78358 180 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 CDK5Q00535 292 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 MEF2CQ06413 473 aaPredicted RBP3.56□□□□□ -1.84
CKS1B-204ENST00000471245 APOFQ13790 326 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 CLVS2Q5SYC1 327 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 ZNF684Q5T5D7 378 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 TMEM236Q5W0B7 351 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 PLET1Q6UQ28 207 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 SLC35E3Q7Z769 313 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 LINC01551Q86U37 167 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 HS3ST5Q8IZT8 346 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 C15orf56Q8N910 161 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 C4orf3Q8WVX3 66 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 RGP1Q92546 391 aaPredicted RBP3.56□□□□□ -1.84
CKS1B-204ENST00000471245 APOL4Q9BPW4 351 aa3.56□□□□□ -1.84
CKS1B-204ENST00000471245 RBFOX1Q9NWB1 397 aaKnown RBP3.56□□□□□ -1.84
CKS1B-204ENST00000471245 IGLV1-50A0A075B6I6 118 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 IGKV1-9A0A0C4DH69 117 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 IGKV1-12A0A0C4DH73 117 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 hADV38S2A0JD32 116 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 ARRDC5A6NEK1 342 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 FABP12A6NFH5 140 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 LEUTXA8MZ59 168 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 C11orf94C9JXX5 98 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 LINC01619G3V211 115 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 BUB1B-PAK6H3BSN5 160 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 M0R129 80 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 OVOL1O14753 267 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 FGF16O43320 207 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 CCDC22O60826 627 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 ENTPD6O75354 484 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 DEDDO75618 318 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 CRTAPO75718 401 aaPredicted RBP3.55□□□□□ -1.84
CKS1B-204ENST00000471245 HAND1O96004 215 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 IGKV1D-12P01611 117 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 IGHV3-7P01780 117 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 OCMP0CE72 109 aaPredicted RBP3.55□□□□□ -1.84
CKS1B-204ENST00000471245 CCL1P22362 96 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 CD40LGP29965 261 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 TPBGQ13641 420 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 GRK1Q15835 563 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 HLA-DRB5Q30154 266 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 OR2T5Q6IEZ7 315 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 HEPN1Q6WQI6 88 aa3.55□□□□□ -1.84
CKS1B-204ENST00000471245 SLC25A26Q70HW3 274 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms