RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 OR10J1P30954 320 aa11.69□□□□□ -0.54
HDAC6-218ENST00000470942 UBE2MP61081 183 aaKnown RBP11.69□□□□□ -0.54
HDAC6-218ENST00000470942 GBGT1Q8N5D6 347 aa11.69□□□□□ -0.54
HDAC6-218ENST00000470942 OR1S2Q8NGQ3 325 aa11.69□□□□□ -0.54
HDAC6-218ENST00000470942 ACY3Q96HD9 319 aa11.69□□□□□ -0.54
HDAC6-218ENST00000470942 METTL26Q96S19 204 aa11.69□□□□□ -0.54
HDAC6-218ENST00000470942 TMEM231Q9H6L2 316 aa11.69□□□□□ -0.54
HDAC6-218ENST00000470942 FLVCR2Q9UPI3 526 aa11.69□□□□□ -0.54
HDAC6-218ENST00000470942 TMED3Q9Y3Q3 217 aa11.69□□□□□ -0.54
HDAC6-218ENST00000470942 PITX3O75364 302 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 IGKV1-17P01599 117 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 CD5P06127 495 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 IAPPP10997 89 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 IL7P13232 177 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 RPL11P62913 178 aaKnown RBP11.68□□□□□ -0.54
HDAC6-218ENST00000470942 PAFAH1B2P68402 229 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 WFDC3Q8IUB2 231 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 Q8WTZ3 238 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 NPIPB3Q92617 1050 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 C7orf50Q9BRJ6 194 aaKnown RBP11.68□□□□□ -0.54
HDAC6-218ENST00000470942 VSIRQ9H7M9 311 aa11.68□□□□□ -0.54
HDAC6-218ENST00000470942 A0A1W2PS18 150 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 C9orf170A2RU37 121 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 DNASE2O00115 360 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-218ENST00000470942 MED6O75586 246 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 DFFBO76075 338 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 IGLC1P0CG04 106 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 SLC25A6P12236 298 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 CMC4P56277 68 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-218ENST00000470942 ATP5IP56385 69 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-218ENST00000470942 GGNBP1Q5YKI7 109 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 FAM90A2PQ658T7 463 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 NARS2Q96I59 477 aaKnown RBP11.67□□□□□ -0.54
HDAC6-218ENST00000470942 EDA2RQ9HAV5 297 aa11.67□□□□□ -0.54
HDAC6-218ENST00000470942 PAIP2BQ9ULR5 123 aaKnown RBP11.67□□□□□ -0.54
HDAC6-218ENST00000470942 FAM90A26D6RGX4 464 aa11.66□□□□□ -0.54
HDAC6-218ENST00000470942 LYL1P12980 280 aa11.66□□□□□ -0.54
HDAC6-218ENST00000470942 YPEL3P61236 119 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-218ENST00000470942 APRG1Q8IVJ8 170 aa11.66□□□□□ -0.54
HDAC6-218ENST00000470942 MAGT1Q9H0U3 335 aa11.66□□□□□ -0.54
HDAC6-218ENST00000470942 OR4E1P0C645 316 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 RPL35AP18077 110 aaKnown RBP11.65□□□□□ -0.54
HDAC6-218ENST00000470942 ANXA7P20073 488 aaKnown RBP11.65□□□□□ -0.54
HDAC6-218ENST00000470942 CRYBB3P26998 211 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 BTCP35070 178 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 APOC4P55056 127 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 RAB11AP62491 216 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 C4orf46Q504U0 113 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 LYG2Q86SG7 212 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 COQ8AQ8NI60 647 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 GRAMD2BQ96HH9 432 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 SLC35E1Q96K37 410 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 MS4A6AQ9H2W1 248 aa11.65□□□□□ -0.54
HDAC6-218ENST00000470942 WRBO00258 174 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 SYNGR2O43760 224 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 ADAP1O75689 374 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 IL4P05112 153 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 HNRNPCP07910 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
HDAC6-218ENST00000470942 RD3LP0DJH9 198 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 GPX4P36969 197 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-218ENST00000470942 P2RY1P47900 373 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 DHRS2Q13268 280 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 ZNF124Q15973 351 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 CASC10Q5T4H9 136 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 CIB3Q96Q77 187 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-218ENST00000470942 RABAC1Q9UI14 185 aa11.64□□□□□ -0.55
HDAC6-218ENST00000470942 ZFP92A6NM28 416 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 PLA2G10O15496 165 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 LYRM1O43325 122 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 TOMM40O96008 361 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 IFNA21P01568 189 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 RPP30P78346 268 aaKnown RBP11.63□□□□□ -0.55
HDAC6-218ENST00000470942 GAMTQ14353 236 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 CNPY1Q3B7I2 92 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 ZFAND6Q6FIF0 208 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 STXBP6Q8NFX7 210 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 MAP6D1Q9H9H5 199 aa11.63□□□□□ -0.55
HDAC6-218ENST00000470942 KMT2CQ8NEZ4 4911 aaKnown RBP11.62□□□□□ -0.55
HDAC6-218ENST00000470942 PSG1P11464 419 aa11.62□□□□□ -0.55
HDAC6-218ENST00000470942 STPG3Q8N7X2 389 aa11.62□□□□□ -0.55
HDAC6-218ENST00000470942 OVOL2Q9BRP0 275 aa11.62□□□□□ -0.55
HDAC6-218ENST00000470942 TRAV2A0A0B4J234 112 aa11.61□□□□□ -0.55
HDAC6-218ENST00000470942 UBE2CO00762 179 aa11.61□□□□□ -0.55
HDAC6-218ENST00000470942 EIF2B2P49770 351 aaKnown RBP11.61□□□□□ -0.55
HDAC6-218ENST00000470942 DEFB131AP59861 70 aa11.61□□□□□ -0.55
HDAC6-218ENST00000470942 USF2Q15853 346 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-218ENST00000470942 SPANXN5Q5MJ07 72 aa11.61□□□□□ -0.55
HDAC6-218ENST00000470942 OR51G1Q8NGK1 321 aa11.61□□□□□ -0.55
HDAC6-218ENST00000470942 C20orf85Q9H1P6 137 aa11.61□□□□□ -0.55
HDAC6-218ENST00000470942 U3KQE9 123 aa11.61□□□□□ -0.55
HDAC6-218ENST00000470942 KIR2DL5BA0A0G2JN68 375 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 KIR2DL5BA0A0G2JPC4 375 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 HELTA6NFD8 242 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 MPTX1A8MV57 137 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 SPRY2O43597 315 aa11.6□□□□□ -0.55
HDAC6-218ENST00000470942 NKX2-1P43699 371 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-218ENST00000470942 POLR2GP62487 172 aaKnown RBP eCLIP11.6□□□□□ -0.55
HDAC6-218ENST00000470942 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms