RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 UBE2G1P62253 170 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 TNFAIP6P98066 277 aaPredicted RBP10.65□□□□□ -0.7
SFXN3-205ENST00000470252 PATE2Q6UY27 113 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 Q6ZVH6 145 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 ORAOV1Q8WV07 137 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 MRPS16Q9Y3D3 137 aaKnown RBP10.65□□□□□ -0.7
SFXN3-205ENST00000470252 A0A1W2PN81 502 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 PLAUP00749 431 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 APOA2P02652 100 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 GATA4P43694 442 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 UNQ5815/PRO19632Q6UWF5 114 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 OR8B3Q8NGG8 313 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 OSR1Q8TAX0 266 aaPredicted RBP10.65□□□□□ -0.7
SFXN3-205ENST00000470252 RNASE8Q8TDE3 154 aaKnown RBP10.65□□□□□ -0.7
SFXN3-205ENST00000470252 NPIPB3Q92617 1050 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 SGK494Q96LW2 274 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 OR8B2Q96RD0 313 aa10.65□□□□□ -0.7
SFXN3-205ENST00000470252 ZNF430Q9H8G1 570 aaPredicted RBP10.65□□□□□ -0.7
SFXN3-205ENST00000470252 IGHV2-26A0A0B4J1V2 119 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 TM4SF5O14894 197 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 HIST1H1EP10412 219 aaKnown RBP10.64□□□□□ -0.71
SFXN3-205ENST00000470252 REG1BP48304 166 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 CHRDL1Q9BU40 450 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 FNDC4Q9H6D8 234 aaPredicted RBP10.64□□□□□ -0.71
SFXN3-205ENST00000470252 LINC00574Q9H8X3 128 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 CCL25O15444 150 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 OR2J3O76001 311 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 NBL1P41271 181 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 ZNF841Q6ZN19 808 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 ZNF788Q6ZQV5 615 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 ZNF833PQ6ZTB9 187 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 FXYD5Q96DB9 178 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 RPH3ALQ9UNE2 315 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 PLCE1Q9P212 2302 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 PLXNB1O43157 2135 aa10.64□□□□□ -0.71
SFXN3-205ENST00000470252 IGLV3-9A0A075B6K5 115 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 TRAV17A0A0B4J275 112 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 TCRBV4S1A1TA0A5B7 111 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 VWC2LB2RUY7 222 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 IGHV1-46P01743 117 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 IGLL1P15814 213 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 C10orf55Q5SWW7 151 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 KIR3DL3Q8N743 410 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 RBMXL3Q8N7X1 1067 aaKnown RBP10.63□□□□□ -0.71
SFXN3-205ENST00000470252 OR2D3Q8NGH3 330 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 BLNKQ8WV28 456 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 CLEC5AQ9NY25 188 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 hADV38S2A0JD32 116 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 H0YJW9 148 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 K7EP13 123 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 SLC25A5P05141 298 aaKnown RBP10.63□□□□□ -0.71
SFXN3-205ENST00000470252 WT1-ASQ06250 92 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 TMEM30BQ3MIR4 351 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 LEMD1Q68G75 181 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 SEM1Q6ZVN7 128 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 LINC00305Q7Z4B0 112 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 SPATA12Q7Z6I5 190 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 C7orf69Q9H7B7 122 aa10.63□□□□□ -0.71
SFXN3-205ENST00000470252 IGKV1D-37A0A075B6S9 117 aa10.62□□□□□ -0.71
SFXN3-205ENST00000470252 TIMM23BQ5SRD1 257 aa10.62□□□□□ -0.71
SFXN3-205ENST00000470252 TCF24Q7RTU0 167 aa10.62□□□□□ -0.71
SFXN3-205ENST00000470252 PDPNQ86YL7 162 aa10.62□□□□□ -0.71
SFXN3-205ENST00000470252 FLYWCH2Q96CP2 140 aaKnown RBP10.62□□□□□ -0.71
SFXN3-205ENST00000470252 COX11Q9Y6N1 276 aa10.62□□□□□ -0.71
SFXN3-205ENST00000470252 ZNF474Q6S9Z5 364 aaPredicted RBP10.62□□□□□ -0.71
SFXN3-205ENST00000470252 ATP5L2Q7Z4Y8 100 aa10.62□□□□□ -0.71
SFXN3-205ENST00000470252 LHFPL4Q7Z7J7 247 aa10.62□□□□□ -0.71
SFXN3-205ENST00000470252 ZNF738Q8NE65 137 aa10.62□□□□□ -0.71
SFXN3-205ENST00000470252 MRPL36Q9P0J6 103 aaKnown RBP10.62□□□□□ -0.71
SFXN3-205ENST00000470252 A0A1B0GXF2 115 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 SH2D7A6NKC9 451 aaPredicted RBP10.61□□□□□ -0.71
SFXN3-205ENST00000470252 FSTL3O95633 263 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 WT1P19544 449 aaPredicted RBP10.61□□□□□ -0.71
SFXN3-205ENST00000470252 ETFRF1Q6IPR1 90 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 ZNF596Q8TC21 504 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 TMEM70Q9BUB7 260 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 EPDR1Q9UM22 224 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 LINC00312Q9Y6C7 94 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 ZFHX2Q9C0A1 2572 aaPredicted RBP10.61□□□□□ -0.71
SFXN3-205ENST00000470252 PGPA6NDG6 321 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 CGB1A6NKQ9 187 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 M0QZ24 198 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 CCL3L1P16619 93 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 ORM2P19652 201 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 SUB1P53999 127 aaKnown RBP eCLIP10.61□□□□□ -0.71
SFXN3-205ENST00000470252 HBBP68871 147 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 TMEM177Q53S58 311 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 PLA2G2CQ5R387 149 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 OR4F17Q8NGA8 305 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 URB1-AS1Q96HZ7 61 aa10.61□□□□□ -0.71
SFXN3-205ENST00000470252 IGLC7A0M8Q6 106 aa10.6□□□□□ -0.71
SFXN3-205ENST00000470252 MBD3L4A6NDZ8 208 aaPredicted RBP10.6□□□□□ -0.71
SFXN3-205ENST00000470252 MBD3L3A6NE82 208 aaPredicted RBP10.6□□□□□ -0.71
SFXN3-205ENST00000470252 MBD3L5A6NJ08 208 aaPredicted RBP10.6□□□□□ -0.71
SFXN3-205ENST00000470252 CIDEAO60543 219 aa10.6□□□□□ -0.71
SFXN3-205ENST00000470252 TNFSF4P23510 183 aa10.6□□□□□ -0.71
SFXN3-205ENST00000470252 CD24P25063 80 aa10.6□□□□□ -0.71
SFXN3-205ENST00000470252 MYCNOSP40205 109 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms