RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TBL2Q9Y4P3 447 aaKnown RBP10.97□□□□□ -0.65
BRCA1-209ENST00000470026 KLF12Q9Y4X4 402 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 C22orf46C9J442 243 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 ZNF253O75346 499 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 ZNF324O75467 553 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-209ENST00000470026 APCSP02743 223 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 TEX45Q8NA69 505 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 STXBP6Q8NFX7 210 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 H1FXQ92522 213 aaKnown RBP10.97□□□□□ -0.65
BRCA1-209ENST00000470026 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 TRGV9Q99603 122 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 VAMP8Q9BV40 100 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 TPSG1Q9NRR2 321 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 SERTAD4Q9NUC0 356 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 CUL9Q8IWT3 2517 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 CA1P00915 261 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-209ENST00000470026 CRYGBP07316 175 aa10.96□□□□□ -0.65
BRCA1-209ENST00000470026 CTRLP40313 264 aa10.96□□□□□ -0.65
BRCA1-209ENST00000470026 TBR1Q16650 682 aa10.96□□□□□ -0.65
BRCA1-209ENST00000470026 ETFRF1Q6IPR1 90 aa10.96□□□□□ -0.65
BRCA1-209ENST00000470026 NIT1Q86X76 327 aa10.96□□□□□ -0.65
BRCA1-209ENST00000470026 OR4B1Q8NGF8 309 aa10.96□□□□□ -0.65
BRCA1-209ENST00000470026 RNASE6Q93091 150 aaKnown RBP10.96□□□□□ -0.65
BRCA1-209ENST00000470026 RITA1Q96K30 269 aa10.96□□□□□ -0.65
BRCA1-209ENST00000470026 CHRDL1Q9BU40 450 aa10.96□□□□□ -0.65
BRCA1-209ENST00000470026 ZNF331Q9NQX6 463 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-209ENST00000470026 PRRG2O14669 202 aa10.96□□□□□ -0.66
BRCA1-209ENST00000470026 SLC25A17O43808 307 aa10.96□□□□□ -0.66
BRCA1-209ENST00000470026 OR2J3O76001 311 aa10.96□□□□□ -0.66
BRCA1-209ENST00000470026 IGHV1-8P0DP01 117 aa10.96□□□□□ -0.66
BRCA1-209ENST00000470026 AMTP48728 403 aa10.96□□□□□ -0.66
BRCA1-209ENST00000470026 PLP1P60201 277 aa10.96□□□□□ -0.66
BRCA1-209ENST00000470026 SLAQ13239 276 aa10.96□□□□□ -0.66
BRCA1-209ENST00000470026 LINC00305Q7Z4B0 112 aa10.96□□□□□ -0.66
BRCA1-209ENST00000470026 NHLRC2Q8NBF2 726 aa10.96□□□□□ -0.66
BRCA1-209ENST00000470026 MFAP2P55001 183 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 KLF5Q13887 457 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-209ENST00000470026 GDF5OSQ5U4N7 250 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 RUSC1-AS1Q66K80 236 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 ZNF841Q6ZN19 808 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 ZNF705AQ6ZN79 300 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-209ENST00000470026 SPACA3Q8IXA5 215 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 TMEM116Q8NCL8 245 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 NUP35Q8NFH5 326 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 C18orf32Q8TCD1 76 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 TSKUQ8WUA8 353 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 CCL17Q92583 94 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 TNFRSF14Q92956 283 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 PERPQ96FX8 193 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 ATG101Q9BSB4 218 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 MLST8Q9BVC4 326 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 SSBP3Q9BWW4 388 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-209ENST00000470026 TNFRSF19Q9NS68 423 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 PAM16Q9Y3D7 125 aa10.95□□□□□ -0.66
BRCA1-209ENST00000470026 TRAV34A0A0B4J273 112 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 DIRC3C9JPN6 131 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 PRRX1P54821 245 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 C19orf35Q6ZS72 473 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 ATP5L2Q7Z4Y8 100 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 ZNF835Q9Y2P0 537 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 ZNF318Q5VUA4 2279 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 A0A1B0GXF2 115 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 IGHV3-48P01763 117 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 KRTDAPP60985 99 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 FAM103A1Q9BTL3 118 aaKnown RBP10.94□□□□□ -0.66
BRCA1-209ENST00000470026 TMEM133Q9H2Q1 129 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 NAV3Q8IVL0 2385 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 CFAP47Q6ZTR5 3102 aa10.94□□□□□ -0.66
BRCA1-209ENST00000470026 VSTM5A8MXK1 200 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 HIST1H1EP10412 219 aaKnown RBP10.93□□□□□ -0.66
BRCA1-209ENST00000470026 EP300Q09472 2414 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-209ENST00000470026 VWC2LB2RUY7 222 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 SHISA9B4DS77 424 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 KLK10O43240 276 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 IGLV1-47P01700 117 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 C3orf79P0CE67 100 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 CA7P43166 264 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 GNG5P63218 68 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 TMEM68Q96MH6 324 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 GPR82Q96P67 336 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 PRSS22Q9GZN4 317 aa10.93□□□□□ -0.66
BRCA1-209ENST00000470026 MOSP00540 346 aa10.92□□□□□ -0.66
BRCA1-209ENST00000470026 GP9P14770 177 aa10.92□□□□□ -0.66
BRCA1-209ENST00000470026 PMCHP20382 165 aa10.92□□□□□ -0.66
BRCA1-209ENST00000470026 RPL27AP46776 148 aaKnown RBP10.92□□□□□ -0.66
BRCA1-209ENST00000470026 CT83Q5H943 113 aa10.92□□□□□ -0.66
BRCA1-209ENST00000470026 ARFGEF3Q5TH69 2177 aa10.92□□□□□ -0.66
BRCA1-209ENST00000470026 E7EQL1 145 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 CORTO00230 105 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 TOMM40O96008 361 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 PLAUP00749 431 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 NBEAP1P0C6P0 100 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 CASP6P55212 293 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 ZNF124Q15973 351 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 ASPHD1Q5U4P2 390 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 Q8NA96 180 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 ALKBH7Q9BT30 221 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms