RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 NUPL2O15504 423 aaKnown RBP13.83□□□□□ -0.2
MRPL28-208ENST00000469744 IGKV1-16P04430 117 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 SAA1P0DJI8 122 aaPredicted RBP13.83□□□□□ -0.2
MRPL28-208ENST00000469744 OPRK1P41145 380 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 KHDC1LQ5JSQ8 128 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 LCN15Q6UWW0 184 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 TGIF2LXQ8IUE1 241 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 OR4F17Q8NGA8 305 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 TMEM167AQ8TBQ9 72 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 TMEM170AQ8WVE7 144 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 NOL4LQ96MY1 436 aaPredicted RBP13.83□□□□□ -0.2
MRPL28-208ENST00000469744 OR4F4Q96R69 305 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 NPVFQ9HCQ7 196 aa13.83□□□□□ -0.2
MRPL28-208ENST00000469744 TEX50A0A1B0GTY4 177 aa13.82□□□□□ -0.2
MRPL28-208ENST00000469744 TCRBV4S1A1TA0A5B7 111 aa13.82□□□□□ -0.2
MRPL28-208ENST00000469744 SEC14L6B5MCN3 397 aa13.82□□□□□ -0.2
MRPL28-208ENST00000469744 IFNA4P05014 189 aa13.82□□□□□ -0.2
MRPL28-208ENST00000469744 ZNF329Q86UD4 541 aa13.82□□□□□ -0.2
MRPL28-208ENST00000469744 RXFP4Q8TDU9 374 aa13.82□□□□□ -0.2
MRPL28-208ENST00000469744 EAF1Q96JC9 268 aaPredicted RBP13.82□□□□□ -0.2
MRPL28-208ENST00000469744 HARBI1Q96MB7 349 aa13.82□□□□□ -0.2
MRPL28-208ENST00000469744 VAX2Q9UIW0 290 aa13.82□□□□□ -0.2
MRPL28-208ENST00000469744 LINC00527Q9UJ94 153 aa13.82□□□□□ -0.2
MRPL28-208ENST00000469744 NCBP2LA6PVI3 153 aaKnown RBP13.81□□□□□ -0.2
MRPL28-208ENST00000469744 PRB2P02812 416 aaPredicted RBP13.81□□□□□ -0.2
MRPL28-208ENST00000469744 OR13C7P0DN81 318 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 LGALS7P47929 136 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 RPS16P62249 146 aaKnown RBP13.81□□□□□ -0.2
MRPL28-208ENST00000469744 BEAN1Q3B7T3 259 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 BSXQ3C1V8 233 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 C2orf83Q53S99 150 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 OXLD1Q5BKU9 147 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 SAMD5Q5TGI4 173 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 SSX7Q7RTT5 188 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 OR4X2Q8NGF9 303 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 OR1L8Q8NGR8 309 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 GNG13Q9P2W3 67 aa13.81□□□□□ -0.2
MRPL28-208ENST00000469744 LSM4Q9Y4Z0 139 aaKnown RBP13.81□□□□□ -0.2
MRPL28-208ENST00000469744 C7orf77A4D0Y5 90 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 CA2P00918 260 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 EBI3Q14213 229 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 TMEM88Q6PEY1 159 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 CBLN2Q8IUK8 224 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 MANBALQ9NQG1 85 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 A0A1W2PN81 502 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 PSMB11A5LHX3 300 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 LINC01548A6NM66 108 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 PF4V1P10720 104 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 ATF4P18848 351 aaPredicted RBP13.8□□□□□ -0.2
MRPL28-208ENST00000469744 CHRNA7P36544 502 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 RPL8P62917 257 aaKnown RBP13.8□□□□□ -0.2
MRPL28-208ENST00000469744 RAB31Q13636 194 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 Q8N6K4 173 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 C15orf54Q8N8G6 183 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 OR2T10Q8NGZ9 312 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 NDUFA4L2Q9NRX3 87 aa13.8□□□□□ -0.2
MRPL28-208ENST00000469744 TSSC4Q9Y5U2 329 aaPredicted RBP13.8□□□□□ -0.2
MRPL28-208ENST00000469744 M0R036 132 aa13.79□□□□□ -0.2
MRPL28-208ENST00000469744 VMA21Q3ZAQ7 101 aa13.79□□□□□ -0.2
MRPL28-208ENST00000469744 SLC35E3Q7Z769 313 aa13.79□□□□□ -0.2
MRPL28-208ENST00000469744 GGTLC1Q9BX51 225 aa13.79□□□□□ -0.2
MRPL28-208ENST00000469744 COMMD5Q9GZQ3 224 aa13.79□□□□□ -0.2
MRPL28-208ENST00000469744 RPS10P5Q9NQ39 176 aa13.79□□□□□ -0.2
MRPL28-208ENST00000469744 MOSP00540 346 aa13.78□□□□□ -0.2
MRPL28-208ENST00000469744 IGLV2-23P01705 113 aa13.78□□□□□ -0.2
MRPL28-208ENST00000469744 CDC34P49427 236 aaPredicted RBP13.78□□□□□ -0.2
MRPL28-208ENST00000469744 FGF8P55075 233 aaPredicted RBP13.78□□□□□ -0.2
MRPL28-208ENST00000469744 ERHP84090 104 aaKnown RBP13.78□□□□□ -0.2
MRPL28-208ENST00000469744 FAM122CQ6P4D5 195 aa13.78□□□□□ -0.2
MRPL28-208ENST00000469744 TEPPQ6URK8 271 aa13.78□□□□□ -0.2
MRPL28-208ENST00000469744 CYB561D1Q8N8Q1 229 aa13.78□□□□□ -0.2
MRPL28-208ENST00000469744 Q8N9W7 124 aa13.78□□□□□ -0.2
MRPL28-208ENST00000469744 TEX45Q8NA69 505 aa13.78□□□□□ -0.2
MRPL28-208ENST00000469744 RAB24Q969Q5 203 aa13.78□□□□□ -0.2
MRPL28-208ENST00000469744 MGST2Q99735 147 aa13.78□□□□□ -0.2
MRPL28-208ENST00000469744 A0A087WWC5 75 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 SMCO3A2RU48 225 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 ZFP92A6NM28 416 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 H3BQ15 152 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 RNASE2P10153 161 aaKnown RBP13.77□□□□□ -0.21
MRPL28-208ENST00000469744 RPL29P47914 159 aaKnown RBP13.77□□□□□ -0.21
MRPL28-208ENST00000469744 PSMB3P49720 205 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 TVP23CQ96ET8 276 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 RNF5Q99942 180 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 NIPSNAP3BQ9BS92 247 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 HINT2Q9BX68 163 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 SLC25A22Q9H936 323 aa13.77□□□□□ -0.21
MRPL28-208ENST00000469744 COLCA2A8K830 154 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 B4DEV8 164 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 IGHG2P01859 326 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 PF4P02776 101 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 MYOD1P15172 320 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 CD33P20138 364 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 GPX4P36969 197 aaPredicted RBP13.76□□□□□ -0.21
MRPL28-208ENST00000469744 PNRC1Q12796 327 aaPredicted RBP13.76□□□□□ -0.21
MRPL28-208ENST00000469744 KPRPQ5T749 579 aaPredicted RBP13.76□□□□□ -0.21
MRPL28-208ENST00000469744 FAM90A2PQ658T7 463 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 C18orf65Q6ZTR6 163 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 TMEM144Q7Z5S9 345 aa13.76□□□□□ -0.21
MRPL28-208ENST00000469744 MRPL41Q8IXM3 137 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms