RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 EXOSC2Q13868 293 aaKnown RBP4.79□□□□□ -1.64
PTCD3-208ENST00000469585 ZNF846Q147U1 533 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 POU2AF1Q16633 256 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 FAM106AQ4KMX7 169 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 TMEM128Q5BJH2 165 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 SLC25A24Q6NUK1 477 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 PUSL1Q8N0Z8 303 aaKnown RBP4.79□□□□□ -1.64
PTCD3-208ENST00000469585 CENPSQ8N2Z9 138 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 ZNF491Q8N8L2 437 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 OR6Q1Q8NGQ2 317 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 COQ8AQ8NI60 647 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 RBPMSQ93062 196 aaKnown RBP4.79□□□□□ -1.64
PTCD3-208ENST00000469585 MRGPRFQ96AM1 343 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 NARS2Q96I59 477 aaKnown RBP4.79□□□□□ -1.64
PTCD3-208ENST00000469585 NAA60Q9H7X0 242 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 GNB4Q9HAV0 340 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 DNAJC4Q9NNZ3 241 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-208ENST00000469585 SLC2A8Q9NY64 477 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 FBN1P35555 2871 aaKnown RBP4.79□□□□□ -1.64
PTCD3-208ENST00000469585 STAB1Q9NY15 2570 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 LINC00854A0A1B0GVQ3 168 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 DUXBA0A1W2PPF3 345 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 C15orf61A6NNL5 157 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 SRRM4A7MD48 611 aaKnown RBP4.78□□□□□ -1.64
PTCD3-208ENST00000469585 CEBPZOSA8MTT3 80 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 SEC14L6B5MCN3 397 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 OVOL1O14753 267 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 SAP30O75446 220 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 IGHV3-11P01762 117 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 OR5AC1P0C628 307 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 SULT1A3P0DMM9 295 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 SULT1A4P0DMN0 295 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 OR13C7P0DN81 318 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 PSMB6P28072 239 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 S100A7P31151 101 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 OR2B8PP59922 312 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 RUNX1Q01196 453 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 PJVKQ0ZLH3 352 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 C15orf32Q32M92 178 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 ETFRF1Q6IPR1 90 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 FAAP20Q6NZ36 180 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 ZNF429Q86V71 674 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 LHFPL1Q86WI0 220 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 TTC9CQ8N5M4 171 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 OR4D10Q8NGI6 311 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 OR1S1Q8NH92 325 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 ENKURQ8TC29 256 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 DYNLRB2Q8TF09 96 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 DCUN1D4Q92564 292 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 IL22RA2Q969J5 263 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 CYYR1Q96J86 154 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 TMEM222Q9H0R3 208 aa4.78□□□□□ -1.64
PTCD3-208ENST00000469585 PEF1Q9UBV8 284 aaKnown RBP4.78□□□□□ -1.64
PTCD3-208ENST00000469585 FAM240BA0A1B0GVZ2 78 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 CRYM-AS1A6NIL9 109 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 NUPL2O15504 423 aaKnown RBP4.77□□□□□ -1.65
PTCD3-208ENST00000469585 GGCTO75223 188 aaKnown RBP4.77□□□□□ -1.65
PTCD3-208ENST00000469585 OR2J3O76001 311 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 BRI3O95415 125 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 IGKV3-20P01619 116 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 HLA-AP01891 365 aaKnown RBP4.77□□□□□ -1.65
PTCD3-208ENST00000469585 FABP1P07148 127 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 CRYGBP07316 175 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 ZNF735P0CB33 412 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 CCR6P51684 374 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 KRTAP10-3P60369 221 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 SPCS3P61009 180 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 HSPE1P61604 102 aaKnown RBP4.77□□□□□ -1.65
PTCD3-208ENST00000469585 NDPQ00604 133 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 EIF4EBP1Q13541 118 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-208ENST00000469585 DEFB136Q30KP8 78 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 SP6Q3SY56 376 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 Q56UQ5 140 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 PLET1Q6UQ28 207 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 C10orf99Q6UWK7 81 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 UBAC2Q8NBM4 344 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 ADAD2Q8NCV1 583 aaKnown RBP4.77□□□□□ -1.65
PTCD3-208ENST00000469585 CASTOR1Q8WTX7 329 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 TMEM190Q8WZ59 177 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 C5orf30Q96GV9 206 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 CIB3Q96Q77 187 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-208ENST00000469585 P2RX4Q99571 388 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 SRRQ9GZT4 340 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 GPN1Q9HCN4 374 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-208ENST00000469585 GPR132Q9UNW8 380 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 V9GYH0 126 aa4.77□□□□□ -1.65
PTCD3-208ENST00000469585 SVEP1Q4LDE5 3571 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 A0A0B4J2A0 478 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 ZNF320A2RRD8 509 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 LYRM1O43325 122 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 GNG7O60262 68 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 IFNA10P01566 189 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 REG1AP05451 166 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 CFC1BP0CG36 223 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 CFC1P0CG37 223 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 IL7P13232 177 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 IGLL1P15814 213 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 UCP1P25874 307 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 HTR2BP41595 481 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms