RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PPP1R17O96001 155 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 USF3Q68DE3 2245 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 TCRBV4S1A1TA0A5B7 111 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 M0R3E3 92 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 SMIM13P0DJ93 91 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 EGR1P18146 543 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 GATA4P43694 442 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 C8orf46Q8TAG6 207 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 TMEM167AQ8TBQ9 72 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 C14orf144Q96I85 54 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 IGHV1-3A0A0C4DH29 117 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 PEX7O00628 323 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 IGHV3-23P01764 117 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 PRR30Q53SZ7 412 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-213ENST00000469300 DNLZQ5SXM8 178 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 H7C1H1 209 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 TNFSF13O75888 250 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 SCGB1A1P11684 91 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 PAPPA-AS1Q5QFB9 102 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 BEND2Q8NDZ0 799 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 NCOR1P1Q9H4R4 102 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 WDR83OSQ9Y284 106 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 C1QTNF9BB2RNN3 333 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 IGHV3-11P01762 117 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 C1QTNF9P0C862 333 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 PRTN3P24158 256 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 Q6AWC8 147 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 SP5Q6BEB4 398 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-213ENST00000469300 CIARTQ8N365 385 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-213ENST00000469300 OR4D5Q8NGN0 318 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 FMC1Q96HJ9 113 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 PGLYRP4Q96LB8 373 aa12.43□□□□□ -0.42
LIMS2-213ENST00000469300 SHANK1Q9Y566 2161 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 DOPEY2Q9Y3R5 2298 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 FANCMQ8IYD8 2048 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 UTRNP46939 3433 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 CGAP01215 116 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 PAX1P15863 534 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 QRFPP83859 136 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 OTORQ9NRC9 128 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 S4R3C0 116 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 HEATR5AQ86XA9 2040 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 IGKV1D-17A0A075B6S4 117 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 C5orf63A6NC05 138 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 F8VVB4 439 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 F8VWA3 439 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 UBE2L6O14933 153 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 DUSP14O95147 198 aaKnown RBP12.42□□□□□ -0.42
LIMS2-213ENST00000469300 CFPP27918 469 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 CMC4P56277 68 aaPredicted RBP12.42□□□□□ -0.42
LIMS2-213ENST00000469300 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 LINC01356Q8N9X3 169 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 Q8TCH9 128 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H4GQ99525 98 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 RNF126Q9BV68 326 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 PRDM13Q9H4Q3 707 aa12.42□□□□□ -0.42
LIMS2-213ENST00000469300 TRAV14DV4A0A0A6YYC5 116 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 NPFFO15130 113 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 SPCS1Q9Y6A9 102 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 IGHV3-49A0A0A0MS15 119 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 MBD3L1Q8WWY6 194 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 SIGMAR1Q99720 223 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 GBF1Q92538 1859 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 CEACAM4O75871 244 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 CD5P06127 495 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 KIAA1644Q3SXP7 199 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 LY6G6FQ5SQ64 297 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 VCX2Q9H322 139 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 FAM181BA6NEQ2 426 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 A6NNC1 897 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H2BKO60814 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H2BJP06899 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H2BOP23527 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H2BBP33778 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H2BDP58876 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H2BCP62807 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST2H2BEQ16778 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H2BHQ93079 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H2BNQ99877 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 HIST1H2BMQ99879 126 aa12.41□□□□□ -0.42
LIMS2-213ENST00000469300 LILRA1O75019 489 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 ASIPP42127 132 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 C19orf54Q5BKX5 351 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 COQ2Q96H96 371 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 WDR87Q6ZQQ6 2873 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 A0A1B0GWB2 263 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 EFNB3Q15768 340 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 IGFL2Q6UWQ7 119 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 DMRTA2Q96SC8 542 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 A0A1B0GW15 77 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 SRP19P09132 144 aaKnown RBP12.4□□□□□ -0.42
LIMS2-213ENST00000469300 CD24P25063 80 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 SPSB3Q6PJ21 355 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 KIR2DL4Q99706 377 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 MEGF9Q9H1U4 602 aa12.4□□□□□ -0.42
LIMS2-213ENST00000469300 A0A1W2PRE2 83 aa12.4□□□□□ -0.43
LIMS2-213ENST00000469300 J3QKU1 62 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms