RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 A0A0B4J2A0 478 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 IGKV1-17P01599 117 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 NPY1RP25929 384 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 CRYBB3P26998 211 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 OR10J1P30954 320 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 CCR6P51684 374 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 RND2P52198 227 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 DEFB131AP59861 70 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 SUPT4H1P63272 117 aaKnown RBP5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 SRPXP78539 464 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 TNFRSF9Q07011 255 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 SMCO1Q147U7 214 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 ZNF124Q15973 351 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 NMSQ5H8A3 153 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 LYZL2Q7Z4W2 148 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 TMED4Q7Z7H5 227 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 LYG2Q86SG7 212 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 TMEM217Q8N7C4 229 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 STXBP6Q8NFX7 210 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 OR1S2Q8NGQ3 325 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 OR1S1Q8NH92 325 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 GRAMD2BQ96HH9 432 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 SHPKQ9UHJ6 478 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 U3KQ87 197 aa5.3□□□□□ -1.56
SNRPD3-205ENST00000468770 DNAH7Q8WXX0 4024 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 TRAV2A0A0B4J234 112 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 CXorf65A6NEN9 183 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 IFNA4P05014 189 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 IGLC1P0CG04 106 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 RD3LP0DJH9 198 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 VAMP1P23763 118 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 P2RY1P47900 373 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 EIF2B2P49770 351 aaKnown RBP5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 AP2S1P53680 142 aaPredicted RBP5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 ATP5IP56385 69 aaPredicted RBP5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 YPEL3P61236 119 aaPredicted RBP5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 PMS2P11Q13670 270 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 KLF9Q13886 244 aaPredicted RBP5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 RBMS2Q15434 407 aaKnown RBP5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 TMEM128Q5BJH2 165 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 LEMD1Q68G75 181 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 DTD1Q8TEA8 209 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 TMEM170AQ8WVE7 144 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 NPIPB3Q92617 1050 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 ACY3Q96HD9 319 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 RARRES2Q99969 163 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 SLC25A21Q9BQT8 299 aaPredicted RBP5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 RBKSQ9H477 322 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 HSPB7Q9UBY9 170 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 CSMD3Q7Z407 3707 aa5.29□□□□□ -1.56
SNRPD3-205ENST00000468770 HELTA6NFD8 242 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 K7EQG2 157 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 CA1P00915 261 aaPredicted RBP5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 IL4P05112 153 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 HNRNPCP07910 306 aaKnown RBP eCLIP5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 INPP1P49441 399 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 SPANXN2Q5MJ10 180 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 STHQ8IWL8 128 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 FAM24BQ8N5W8 94 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 GATAD1Q8WUU5 269 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 DEDD2Q8WXF8 326 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 TRIM63Q969Q1 353 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 V9GYH0 126 aa5.28□□□□□ -1.56
SNRPD3-205ENST00000468770 DUXBA0A1W2PPF3 345 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 NUPR2A6NF83 97 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 ZFP92A6NM28 416 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 TOMM40O96008 361 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 ZNF688P0C7X2 276 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 PSG1P11464 419 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 ATF4P18848 351 aaPredicted RBP5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 GPX4P36969 197 aaPredicted RBP5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 RAB11AP62491 216 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 EWSR1Q01844 656 aaKnown RBP eCLIP5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 DHRS2Q13268 280 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 USF2Q15853 346 aaPredicted RBP5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 ZNF79Q15937 498 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 CEMP1Q6PRD7 247 aaPredicted RBP5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 C16orf54Q6UWD8 224 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 CCDC190Q86UF4 302 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 LRTM2Q8N967 370 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 OR11H2Q8NH07 326 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 DCANP1Q8TF63 244 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 STARD9Q9P2P6 4700 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 PFDN2Q9UHV9 154 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 PAIP2BQ9ULR5 123 aaKnown RBP5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 KLK5Q9Y337 293 aaPredicted RBP5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 TMED3Q9Y3Q3 217 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 U3KQE9 123 aa5.27□□□□□ -1.57
SNRPD3-205ENST00000468770 FAM90A26D6RGX4 464 aa5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 ZNF701M0R085 212 aaPredicted RBP5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 BUB3O43684 328 aa5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 PITX3O75364 302 aa5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 MED6O75586 246 aa5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 SFT2D2O95562 160 aa5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 FABP1P07148 127 aa5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 IAPPP10997 89 aa5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 SLC25A6P12236 298 aa5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 SNRPD3P62318 126 aaKnown RBP5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 RPP30P78346 268 aaKnown RBP5.26□□□□□ -1.57
SNRPD3-205ENST00000468770 PPP1R1AQ13522 171 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms