RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ASB13Q8WXK3 278 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 PINX1Q96BK5 328 aaKnown RBP3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 HYLS1Q96M11 299 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 CIB3Q96Q77 187 aaPredicted RBP3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 OR4C12Q96R67 309 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 SLC25A31Q9H0C2 315 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 ESM1Q9NQ30 184 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 TMEM14BQ9NUH8 114 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF257Q9Y2Q1 563 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 FBXO7Q9Y3I1 522 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 HSPB11Q9Y547 144 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 S4R3C0 116 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF469Q96JG9 3925 aaPredicted RBP3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 FLNBO75369 2602 aaKnown RBP3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 ACANP16112 2415 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 TRAV41A0A0B4J266 112 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 KANTRA0A1W2PQU2 76 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 IGLC7A0M8Q6 106 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 HMSDA8MTL9 139 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 TCF21O43680 179 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 OR2J3O76001 311 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 IGHV3-23P01764 117 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 FAM157CP0CG43 387 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 RNASE2P10153 161 aaKnown RBP3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 EDN2P20800 178 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 NPY1RP25929 384 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 HTR2BP41595 481 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 SULT1A1P50225 295 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 UBA52P62987 128 aaKnown RBP3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 EWSR1Q01844 656 aaKnown RBP eCLIP3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 SLC38A11Q08AI6 406 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 ARL16Q0P5N6 197 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 OPCMLQ14982 345 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 HIST2H2BDQ6DRA6 164 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 ACOT7LQ6ZUV0 252 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF329Q86UD4 541 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 STX12Q86Y82 276 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 TTC9CQ8N5M4 171 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 TMEM86BQ8N661 226 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 UBAC2Q8NBM4 344 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 SLC24A4Q8NFF2 622 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 OR10P1Q8NGE3 313 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 OR1S2Q8NGQ3 325 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 OR5C1Q8NGR4 320 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 OR2T6Q8NHC8 308 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 SGMS2Q8NHU3 365 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 ACY3Q96HD9 319 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 P2RX4Q99571 388 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 ARL6Q9H0F7 186 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 C11orf1Q9H5F2 150 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF702PQ9H963 129 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 WFDC1Q9HC57 220 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 LYRM2Q9NU23 88 aaPredicted RBP3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 CACFD1Q9UGQ2 172 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 TNFSF18Q9UNG2 199 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 U3KQ87 197 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 SVEP1Q4LDE5 3571 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 FLNAP21333 2647 aaKnown RBP3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 CREBBPQ92793 2442 aa3.18□□□□□ -1.9
TMEM39A-204ENST00000468545 TEX15Q9BXT5 2789 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 TET2Q6N021 2002 aaPredicted RBP3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 A0A0D9SG52 128 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 PSMB11A5LHX3 300 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 RNF222A6NCQ9 220 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 C15orf62A8K5M9 175 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 CYB5BO43169 146 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 MT-CO2P00403 227 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 IFNA5P01569 189 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 IGHV3-11P01762 117 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 IGHG2P01859 326 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 TRGV3P03979 118 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 CTRB1P17538 263 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 HOXD3P31249 432 aaPredicted RBP3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 S100A11P31949 105 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 OPRK1P41145 380 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 MFAP2P55001 183 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 TPPP2P59282 170 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 TAS2R30P59541 319 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 HILS1P60008 231 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 SLC35B1P78383 322 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 ATP5G2Q06055 141 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 OR2F1Q13607 317 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 AARDQ4LEZ3 155 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 PDLIM3Q53GG5 364 aaPredicted RBP3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 AKIRIN2Q53H80 203 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 C2orf83Q53S99 150 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 Q56UQ5 140 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 RPL7L1Q6DKI1 246 aaKnown RBP3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 CTRB2Q6GPI1 263 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 LAMTOR1Q6IAA8 161 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 C10orf99Q6UWK7 81 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 TMEM14EPQ6UXP3 125 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 HSD17B13Q7Z5P4 300 aaPredicted RBP3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 HAPLN4Q86UW8 402 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 STPG2Q8N412 459 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 C9orf62Q8N4C0 152 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 KCNRGQ8N5I3 272 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 PRR26Q8N8Z3 221 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 SCGB1C1Q8TD33 95 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 PPP1R14BQ96C90 147 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms