RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CTSGP08311 255 aa11.69□□□□□ -0.54
SNIP1-202ENST00000468040 OR10J1P30954 320 aa11.69□□□□□ -0.54
SNIP1-202ENST00000468040 ATP6V1FQ16864 119 aa11.69□□□□□ -0.54
SNIP1-202ENST00000468040 ZNF546Q86UE3 836 aa11.69□□□□□ -0.54
SNIP1-202ENST00000468040 TCTE3Q8IZS6 198 aa11.69□□□□□ -0.54
SNIP1-202ENST00000468040 INO80EQ8NBZ0 244 aaPredicted RBP11.69□□□□□ -0.54
SNIP1-202ENST00000468040 ST6GAL2Q96JF0 529 aa11.69□□□□□ -0.54
SNIP1-202ENST00000468040 STAB1Q9NY15 2570 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 SMCO3A2RU48 225 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 ZFP92A6NM28 416 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 FABP1P07148 127 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 IGLC1P0CG04 106 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 ADMP35318 185 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 NHLH2Q02577 135 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 GPHB5Q86YW7 130 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 AQP10Q96PS8 301 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 CHRDL1Q9BU40 450 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 TMEM147Q9BVK8 224 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 NPVFQ9HCQ7 196 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 UQCC1Q9NVA1 299 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 HSPB11Q9Y547 144 aa11.68□□□□□ -0.54
SNIP1-202ENST00000468040 SMLR1H3BR10 107 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 OR2C1O95371 312 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 SLURP1P55000 103 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 VWC2Q2TAL6 325 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 FAM106AQ4KMX7 169 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 ZNF600Q6ZNG1 722 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 C1QL4Q86Z23 238 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 LINC00482Q8N8I6 264 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 THAP8Q8NA92 274 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 OR5C1Q8NGR4 320 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 TNFSF18Q9UNG2 199 aa11.67□□□□□ -0.54
SNIP1-202ENST00000468040 NDUFA4O00483 81 aa11.66□□□□□ -0.54
SNIP1-202ENST00000468040 IGKV1-17P01599 117 aa11.66□□□□□ -0.54
SNIP1-202ENST00000468040 SYNJ2BPP57105 145 aa11.66□□□□□ -0.54
SNIP1-202ENST00000468040 YPEL3P61236 119 aaPredicted RBP11.66□□□□□ -0.54
SNIP1-202ENST00000468040 KLF5Q13887 457 aaPredicted RBP11.66□□□□□ -0.54
SNIP1-202ENST00000468040 TIGITQ495A1 244 aa11.66□□□□□ -0.54
SNIP1-202ENST00000468040 TEPPQ6URK8 271 aa11.66□□□□□ -0.54
SNIP1-202ENST00000468040 TRGV9Q99603 122 aa11.66□□□□□ -0.54
SNIP1-202ENST00000468040 IGHV3-35A0A0C4DH35 117 aa11.65□□□□□ -0.54
SNIP1-202ENST00000468040 LGALS9O00182 355 aa11.65□□□□□ -0.54
SNIP1-202ENST00000468040 ARPC5O15511 151 aa11.65□□□□□ -0.54
SNIP1-202ENST00000468040 DFFBO76075 338 aa11.65□□□□□ -0.54
SNIP1-202ENST00000468040 CLINT1Q14677 625 aa11.65□□□□□ -0.54
SNIP1-202ENST00000468040 TREML4Q6UXN2 200 aa11.65□□□□□ -0.54
SNIP1-202ENST00000468040 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
SNIP1-202ENST00000468040 Q8WTZ3 238 aa11.65□□□□□ -0.54
SNIP1-202ENST00000468040 DLX4Q92988 240 aaPredicted RBP11.65□□□□□ -0.54
SNIP1-202ENST00000468040 IGKV1D-37A0A075B6S9 117 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 IGKV1OR2-108A0A075B7D4 117 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 UBE2L5PA0A1B0GUS4 154 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 ZNF320A2RRD8 509 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 RNF222A6NCQ9 220 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 HMSDA8MTL9 139 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 OVOL1O14753 267 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 YIF1AO95070 293 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 TOMM40O96008 361 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 RD3LP0DJH9 198 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 RAB31Q13636 194 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 PRR31Q5SQ13 230 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 TMEM190Q8WZ59 177 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 ATP5SQ99766 215 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 PEMTQ9UBM1 199 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 WDR83OSQ9Y284 106 aa11.64□□□□□ -0.55
SNIP1-202ENST00000468040 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
SNIP1-202ENST00000468040 PUS1Q9Y606 427 aaKnown RBP eCLIP11.64□□□□□ -0.55
SNIP1-202ENST00000468040 MPDU1O75352 247 aa11.63□□□□□ -0.55
SNIP1-202ENST00000468040 CFDP00746 253 aaPredicted RBP11.63□□□□□ -0.55
SNIP1-202ENST00000468040 C1QBP02746 253 aa11.63□□□□□ -0.55
SNIP1-202ENST00000468040 CD33P20138 364 aa11.63□□□□□ -0.55
SNIP1-202ENST00000468040 OR11H4Q8NGC9 324 aa11.63□□□□□ -0.55
SNIP1-202ENST00000468040 OR9G4Q8NGQ1 327 aa11.63□□□□□ -0.55
SNIP1-202ENST00000468040 SMIM3Q9BZL3 60 aa11.63□□□□□ -0.55
SNIP1-202ENST00000468040 MFFQ9GZY8 342 aa11.63□□□□□ -0.55
SNIP1-202ENST00000468040 UFC1Q9Y3C8 167 aa11.63□□□□□ -0.55
SNIP1-202ENST00000468040 A8MWP6 167 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 PSG1P11464 419 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 AP2S1P53680 142 aaPredicted RBP11.62□□□□□ -0.55
SNIP1-202ENST00000468040 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
SNIP1-202ENST00000468040 SELENOTP62341 195 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 ZNF90Q03938 601 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 OR2F1Q13607 317 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 ZNF266Q14584 549 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 ZNF345Q14585 488 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 BTNL8Q6UX41 500 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 TOMM20LQ6UXN7 152 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 UNQ9165/PRO28630Q6UXU0 137 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 CYP2G1PQ6ZSU1 146 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 WFDC9Q8NEX5 89 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 OR51G1Q8NGK1 321 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 HYLS1Q96M11 299 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 NEURL2Q9BR09 285 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 GINS3Q9BRX5 216 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 MCRIP2Q9BUT9 160 aaKnown RBP11.62□□□□□ -0.55
SNIP1-202ENST00000468040 C20orf24Q9BUV8 137 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 ELOVL1Q9BW60 279 aa11.62□□□□□ -0.55
SNIP1-202ENST00000468040 DAZ1Q9NQZ3 744 aaKnown RBP11.62□□□□□ -0.55
SNIP1-202ENST00000468040 FBXL17Q9UF56 701 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms