RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ZNF431Q8TF32 576 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-207ENST00000467985 UBQLN2Q9UHD9 624 aa14.19□□□□□ -0.14
COL7A1-207ENST00000467985 TMEM56-RWDD3S4R434 201 aa14.19□□□□□ -0.14
COL7A1-207ENST00000467985 RYR2Q92736 4967 aa14.19□□□□□ -0.14
COL7A1-207ENST00000467985 KIR2DL5BA0A0G2JN68 375 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 KIR2DL5BA0A0G2JPC4 375 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 LCE6AA0A183 80 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 TMEM50AO95807 157 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 HTR2BP41595 481 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 OXA1LQ15070 435 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 BSXQ3C1V8 233 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 TOMM20LQ6UXN7 152 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 Q6ZRM9 215 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 Q6ZWC4 215 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 KIR2DL5AQ8N109 375 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 KIR2DL5BQ8NHK3 375 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 LHFPL5Q8TAF8 219 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 OVOL2Q9BRP0 275 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 TP53TG1Q9Y2A0 90 aa14.18□□□□□ -0.14
COL7A1-207ENST00000467985 DUXBA0A1W2PPF3 345 aa14.17□□□□□ -0.14
COL7A1-207ENST00000467985 IFNA21P01568 189 aa14.17□□□□□ -0.14
COL7A1-207ENST00000467985 OPRK1P41145 380 aa14.17□□□□□ -0.14
COL7A1-207ENST00000467985 PAFAH1B2P68402 229 aa14.17□□□□□ -0.14
COL7A1-207ENST00000467985 C12orf45Q8N5I9 185 aaPredicted RBP14.17□□□□□ -0.14
COL7A1-207ENST00000467985 HEYLQ9NQ87 328 aaPredicted RBP14.17□□□□□ -0.14
COL7A1-207ENST00000467985 CACNG5Q9UF02 275 aa14.17□□□□□ -0.14
COL7A1-207ENST00000467985 PUS1Q9Y606 427 aaKnown RBP eCLIP14.17□□□□□ -0.14
COL7A1-207ENST00000467985 A0A0B4J2A0 478 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 RPS10-NUDT3A0A1W2PQS6 291 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 CLN5O75503 358 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 HOXB5P09067 269 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 LYZL2Q7Z4W2 148 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 STPG3Q8N7X2 389 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 OR4X1Q8NH49 305 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 MITD1Q8WV92 249 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 TMEM231Q9H6L2 316 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 SHPKQ9UHJ6 478 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 SACSQ9NZJ4 4579 aa14.16□□□□□ -0.14
COL7A1-207ENST00000467985 IGHV3-49A0A0A0MS15 119 aa14.15□□□□□ -0.14
COL7A1-207ENST00000467985 SNRPGP15A8MWD9 76 aa14.15□□□□□ -0.14
COL7A1-207ENST00000467985 SSNA1O43805 119 aa14.15□□□□□ -0.14
COL7A1-207ENST00000467985 FAM90A2PQ658T7 463 aa14.15□□□□□ -0.14
COL7A1-207ENST00000467985 WFDC3Q8IUB2 231 aa14.15□□□□□ -0.14
COL7A1-207ENST00000467985 LRTM2Q8N967 370 aa14.15□□□□□ -0.14
COL7A1-207ENST00000467985 GPR146Q96CH1 333 aa14.15□□□□□ -0.14
COL7A1-207ENST00000467985 FNDC4Q9H6D8 234 aaPredicted RBP14.15□□□□□ -0.14
COL7A1-207ENST00000467985 VSIRQ9H7M9 311 aa14.15□□□□□ -0.14
COL7A1-207ENST00000467985 ZFAND3Q9H8U3 227 aa14.15□□□□□ -0.14
COL7A1-207ENST00000467985 TRAV30A0A087WSZ9 112 aa14.14□□□□□ -0.15
COL7A1-207ENST00000467985 CEBPZOSA8MTT3 80 aa14.14□□□□□ -0.15
COL7A1-207ENST00000467985 SULT1A3P0DMM9 295 aa14.14□□□□□ -0.15
COL7A1-207ENST00000467985 SULT1A4P0DMN0 295 aa14.14□□□□□ -0.15
COL7A1-207ENST00000467985 C2orf83Q53S99 150 aa14.14□□□□□ -0.15
COL7A1-207ENST00000467985 TCF24Q7RTU0 167 aa14.14□□□□□ -0.15
COL7A1-207ENST00000467985 NOXA1Q86UR1 476 aa14.14□□□□□ -0.15
COL7A1-207ENST00000467985 RNASEH2CQ8TDP1 164 aaKnown RBP14.14□□□□□ -0.15
COL7A1-207ENST00000467985 TMED3Q9Y3Q3 217 aa14.14□□□□□ -0.15
COL7A1-207ENST00000467985 ALG5Q9Y673 324 aa14.14□□□□□ -0.15
COL7A1-207ENST00000467985 IGHV3OR16-13A0A075B7E8 117 aa14.13□□□□□ -0.15
COL7A1-207ENST00000467985 IGHV3-74A0A0B4J1X5 117 aa14.13□□□□□ -0.15
COL7A1-207ENST00000467985 A0A1W2PS18 150 aa14.13□□□□□ -0.15
COL7A1-207ENST00000467985 FAM25EA8MYX2 175 aa14.13□□□□□ -0.15
COL7A1-207ENST00000467985 SPRY2O43597 315 aa14.13□□□□□ -0.15
COL7A1-207ENST00000467985 SLC25A4P12235 298 aa14.13□□□□□ -0.15
COL7A1-207ENST00000467985 NPPCP23582 126 aa14.13□□□□□ -0.15
COL7A1-207ENST00000467985 TFPI2P48307 235 aa14.13□□□□□ -0.15
COL7A1-207ENST00000467985 ST8SIA2Q92186 375 aa14.13□□□□□ -0.15
COL7A1-207ENST00000467985 IGKV3-7A0A075B6H7 116 aa14.12□□□□□ -0.15
COL7A1-207ENST00000467985 TRAV2A0A0B4J234 112 aa14.12□□□□□ -0.15
COL7A1-207ENST00000467985 A0A1B0GU03 582 aa14.12□□□□□ -0.15
COL7A1-207ENST00000467985 ADAP1O75689 374 aa14.12□□□□□ -0.15
COL7A1-207ENST00000467985 GGNBP1Q5YKI7 109 aa14.12□□□□□ -0.15
COL7A1-207ENST00000467985 SLC24A4Q8NFF2 622 aa14.12□□□□□ -0.15
COL7A1-207ENST00000467985 OR1S1Q8NH92 325 aa14.12□□□□□ -0.15
COL7A1-207ENST00000467985 NARS2Q96I59 477 aaKnown RBP14.12□□□□□ -0.15
COL7A1-207ENST00000467985 METTL26Q96S19 204 aa14.12□□□□□ -0.15
COL7A1-207ENST00000467985 MAP6D1Q9H9H5 199 aa14.12□□□□□ -0.15
COL7A1-207ENST00000467985 MRPL36Q9P0J6 103 aaKnown RBP14.12□□□□□ -0.15
COL7A1-207ENST00000467985 C5orf51A6NDU8 294 aa14.11□□□□□ -0.15
COL7A1-207ENST00000467985 DNASE2O00115 360 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-207ENST00000467985 APOHP02749 345 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-207ENST00000467985 RPL35AP18077 110 aaKnown RBP14.11□□□□□ -0.15
COL7A1-207ENST00000467985 SMCO1Q147U7 214 aa14.11□□□□□ -0.15
COL7A1-207ENST00000467985 MLANAQ16655 118 aa14.11□□□□□ -0.15
COL7A1-207ENST00000467985 DEFB135Q30KP9 77 aa14.11□□□□□ -0.15
COL7A1-207ENST00000467985 NMSQ5H8A3 153 aa14.11□□□□□ -0.15
COL7A1-207ENST00000467985 ETFRF1Q6IPR1 90 aa14.11□□□□□ -0.15
COL7A1-207ENST00000467985 APRG1Q8IVJ8 170 aa14.11□□□□□ -0.15
COL7A1-207ENST00000467985 GBGT1Q8N5D6 347 aa14.11□□□□□ -0.15
COL7A1-207ENST00000467985 RNF183Q96D59 192 aa14.11□□□□□ -0.15
COL7A1-207ENST00000467985 C7orf66A4D0T2 115 aa14.1□□□□□ -0.15
COL7A1-207ENST00000467985 CCSO14618 274 aa14.1□□□□□ -0.15
COL7A1-207ENST00000467985 GOSR2O14653 212 aa14.1□□□□□ -0.15
COL7A1-207ENST00000467985 DFFBO76075 338 aa14.1□□□□□ -0.15
COL7A1-207ENST00000467985 JTBO76095 146 aa14.1□□□□□ -0.15
COL7A1-207ENST00000467985 IGKV1-17P01599 117 aa14.1□□□□□ -0.15
COL7A1-207ENST00000467985 CRYBB3P26998 211 aa14.1□□□□□ -0.15
COL7A1-207ENST00000467985 RPL11P62913 178 aaKnown RBP14.1□□□□□ -0.15
COL7A1-207ENST00000467985 TNFRSF9Q07011 255 aa14.1□□□□□ -0.15
COL7A1-207ENST00000467985 OR1S2Q8NGQ3 325 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms