RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SAV1Q9H4B6 383 aaPredicted RBP1.74□□□□□ -2.13
XRN1-206ENST00000467077 HMG20AQ9NP66 347 aa1.74□□□□□ -2.13
XRN1-206ENST00000467077 GID8Q9NWU2 228 aa1.74□□□□□ -2.13
XRN1-206ENST00000467077 FAM206AQ9NX38 181 aa1.74□□□□□ -2.13
XRN1-206ENST00000467077 IDI2-AS1Q9NZ38 188 aa1.74□□□□□ -2.13
XRN1-206ENST00000467077 V9GYQ6 96 aa1.74□□□□□ -2.13
XRN1-206ENST00000467077 V9GYS6 101 aa1.74□□□□□ -2.13
XRN1-206ENST00000467077 TNCP24821 2201 aa1.74□□□□□ -2.13
XRN1-206ENST00000467077 A0A075B6Q4 140 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 IGKV1-27A0A075B6S5 117 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 TRBV9A0A0B4J1U6 114 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 COLCA2A8K830 154 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 LYRM9A8MSI8 78 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 BBIP1A8MTZ0 92 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 C16orf90A8MZG2 172 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 SMKR1H3BMG3 65 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 FKBP6O75344 327 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 E2F6O75461 281 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 GATBO75879 557 aaKnown RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 SOX14O95416 240 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 IGLV3-1P01715 115 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 HLA-DRB1P01911 266 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 TTRP02766 147 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 CSN2P05814 226 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 SERPINE2P07093 398 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 OCM2P0CE71 109 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 OCMP0CE72 109 aaPredicted RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 CTRB1P17538 263 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 ALOX5APP20292 161 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 BMI1P35226 326 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 TCTAP57738 103 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 ACTBP60709 375 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 MAGOHP61326 146 aaKnown RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 VSNL1P62760 191 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 TMEM267Q0VDI3 215 aaPredicted RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 DEFB135Q30KP9 77 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 ZNF829Q3KNS6 432 aaPredicted RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 TNFAIP8L3Q5GJ75 292 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 BCL2L15Q5TBC7 163 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 Q5W150 140 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 DEGS2Q6QHC5 323 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 UNQ5815/PRO19632Q6UWF5 114 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 SLC16A13Q7RTY0 426 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 ZNF645Q8N7E2 425 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 TCTEX1D1Q8N7M0 179 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 CHST4Q8NCG5 386 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 TMEM104Q8NE00 496 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 OR8D4Q8NGM9 314 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 OR2K2Q8NGT1 345 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 TSEN15Q8WW01 171 aaKnown RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 DYDC1Q8WWB3 177 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 MCUR1Q96AQ8 359 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 RCN3Q96D15 328 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 BORCS8Q96FH0 119 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 GALNT14Q96FL9 552 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 RDH12Q96NR8 316 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 SPACA5Q96QH8 159 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 ZNF251Q9BRH9 671 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 ZNF2Q9BSG1 426 aaPredicted RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 FAM103A1Q9BTL3 118 aaKnown RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 TSSK6Q9BXA6 273 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 ANKRD60Q9BZ19 345 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 GEMIN7Q9H840 131 aaKnown RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 IL20Q9NYY1 176 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 CCDC59Q9P031 241 aaKnown RBP1.73□□□□□ -2.13
XRN1-206ENST00000467077 BAIAP2Q9UQB8 552 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 TP53TG1Q9Y2A0 90 aa1.73□□□□□ -2.13
XRN1-206ENST00000467077 IGLV2-18A0A075B6J9 118 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 IGHV3-43A0A0B4J1X8 118 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 A0A0G2JND7 137 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 A0A1B0GTI1 187 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 ZNF705GA8MUZ8 300 aaPredicted RBP1.72□□□□□ -2.13
XRN1-206ENST00000467077 H0YJX3 145 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 H3BN98 237 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 L7N2F9 121 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 NME4O00746 187 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 BET1O15155 118 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 RBBP9O75884 186 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 TRBV12-3P01733 135 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 EIF4EP06730 217 aaKnown RBP1.72□□□□□ -2.13
XRN1-206ENST00000467077 CD3GP09693 182 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 CGB3P0DN86 165 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 CGB7P0DN87 165 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 MAGEA2P43356 314 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 RBP2P50120 134 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 CRISP1P54107 249 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 DEFA5Q01523 94 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 CDK5R1Q15078 307 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 MAPRE2Q15555 327 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 C5orf64Q2M2E5 130 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 RPEL1Q2QD12 228 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 DEFB114Q30KQ6 69 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 ORMDL2Q53FV1 153 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 AKIRIN2Q53H80 203 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 COQ5Q5HYK3 327 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 SPANXN2Q5MJ10 180 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 GPR107Q5VW38 600 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 ZNF660Q6AZW8 331 aaPredicted RBP1.72□□□□□ -2.13
XRN1-206ENST00000467077 GLYATQ6IB77 296 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 SLC25A34Q6PIV7 304 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms