RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 OR51S1Q8NGJ8 323 aa12.88□□□□□ -0.35
COL7A1-206ENST00000466591 RNASEH2CQ8TDP1 164 aaKnown RBP12.88□□□□□ -0.35
COL7A1-206ENST00000466591 GLYATL2Q8WU03 294 aa12.88□□□□□ -0.35
COL7A1-206ENST00000466591 ACY3Q96HD9 319 aa12.88□□□□□ -0.35
COL7A1-206ENST00000466591 RTBDNQ9BSG5 229 aaPredicted RBP12.88□□□□□ -0.35
COL7A1-206ENST00000466591 FNDC4Q9H6D8 234 aaPredicted RBP12.88□□□□□ -0.35
COL7A1-206ENST00000466591 RSL24D1Q9UHA3 163 aaKnown RBP12.88□□□□□ -0.35
COL7A1-206ENST00000466591 DNAH1Q9P2D7 4330 aa12.87□□□□□ -0.35
COL7A1-206ENST00000466591 AKR1C4P17516 323 aa12.87□□□□□ -0.35
COL7A1-206ENST00000466591 NPY1RP25929 384 aa12.87□□□□□ -0.35
COL7A1-206ENST00000466591 AP2S1P53680 142 aaPredicted RBP12.87□□□□□ -0.35
COL7A1-206ENST00000466591 DHRS2Q13268 280 aa12.87□□□□□ -0.35
COL7A1-206ENST00000466591 Q6ZRM9 215 aa12.87□□□□□ -0.35
COL7A1-206ENST00000466591 LILRB2Q8N423 598 aa12.87□□□□□ -0.35
COL7A1-206ENST00000466591 GPR146Q96CH1 333 aa12.87□□□□□ -0.35
COL7A1-206ENST00000466591 CCDC59Q9P031 241 aaKnown RBP12.87□□□□□ -0.35
COL7A1-206ENST00000466591 MRPL36Q9P0J6 103 aaKnown RBP12.87□□□□□ -0.35
COL7A1-206ENST00000466591 CTDSPLO15194 276 aa12.86□□□□□ -0.35
COL7A1-206ENST00000466591 DEFB4AO15263 64 aa12.86□□□□□ -0.35
COL7A1-206ENST00000466591 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL7A1-206ENST00000466591 CRYBB3P26998 211 aa12.86□□□□□ -0.35
COL7A1-206ENST00000466591 NANOS2P60321 138 aaKnown RBP12.86□□□□□ -0.35
COL7A1-206ENST00000466591 C2orf83Q53S99 150 aa12.86□□□□□ -0.35
COL7A1-206ENST00000466591 TMEM41BQ5BJD5 291 aa12.86□□□□□ -0.35
COL7A1-206ENST00000466591 PVRIGQ6DKI7 326 aa12.86□□□□□ -0.35
COL7A1-206ENST00000466591 FAM24BQ8N5W8 94 aa12.86□□□□□ -0.35
COL7A1-206ENST00000466591 PFDN2Q9UHV9 154 aa12.86□□□□□ -0.35
COL7A1-206ENST00000466591 PIGBOS1A0A0B4J2F0 54 aa12.85□□□□□ -0.35
COL7A1-206ENST00000466591 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
COL7A1-206ENST00000466591 IL4P05112 153 aa12.85□□□□□ -0.35
COL7A1-206ENST00000466591 SPP1P10451 314 aa12.85□□□□□ -0.35
COL7A1-206ENST00000466591 FAUP35544 74 aaKnown RBP12.85□□□□□ -0.35
COL7A1-206ENST00000466591 ACTL10Q5JWF8 245 aa12.85□□□□□ -0.35
COL7A1-206ENST00000466591 MORN3Q6PF18 240 aaPredicted RBP12.85□□□□□ -0.35
COL7A1-206ENST00000466591 LHFPL5Q8TAF8 219 aa12.85□□□□□ -0.35
COL7A1-206ENST00000466591 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
COL7A1-206ENST00000466591 GPR132Q9UNW8 380 aa12.85□□□□□ -0.35
COL7A1-206ENST00000466591 FABP12A6NFH5 140 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 ALDH3B2P48448 385 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 TMBIM6P55061 237 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 SNRPD3P62318 126 aaKnown RBP12.84□□□□□ -0.35
COL7A1-206ENST00000466591 SRPXP78539 464 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 BSXQ3C1V8 233 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 PSMG4Q5JS54 123 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 PRSS54Q6PEW0 395 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 OR1S1Q8NH92 325 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 IL22RA2Q969J5 263 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 PAIP2BQ9ULR5 123 aaKnown RBP12.84□□□□□ -0.35
COL7A1-206ENST00000466591 TMEM56-RWDD3S4R434 201 aa12.84□□□□□ -0.35
COL7A1-206ENST00000466591 ANKRD20A5PA0PJZ0 165 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 KNCNA6PVL3 124 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 K7EQG2 157 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 IGKV1-17P01599 117 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 IGLC1P0CG04 106 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 RD3LP0DJH9 198 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 CCR6P51684 374 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 YPEL3P61236 119 aaPredicted RBP12.83□□□□□ -0.36
COL7A1-206ENST00000466591 SMCO1Q147U7 214 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 LGI3Q8N145 548 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 DTD1Q8TEA8 209 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 C2CD4CQ8TF44 421 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 NPIPB3Q92617 1050 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 BCL7BQ9BQE9 202 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 PBDC1Q9BVG4 233 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 PRR13Q9NZ81 148 aa12.83□□□□□ -0.36
COL7A1-206ENST00000466591 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
COL7A1-206ENST00000466591 NUP62P37198 522 aaPredicted RBP12.82□□□□□ -0.36
COL7A1-206ENST00000466591 AP3S2P59780 193 aa12.82□□□□□ -0.36
COL7A1-206ENST00000466591 NUTF2P61970 127 aaKnown RBP12.82□□□□□ -0.36
COL7A1-206ENST00000466591 AARDQ4LEZ3 155 aa12.82□□□□□ -0.36
COL7A1-206ENST00000466591 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
COL7A1-206ENST00000466591 MCFD2Q8NI22 146 aa12.82□□□□□ -0.36
COL7A1-206ENST00000466591 DYNC2LI1Q8TCX1 351 aa12.82□□□□□ -0.36
COL7A1-206ENST00000466591 PPP1R14BQ96C90 147 aa12.82□□□□□ -0.36
COL7A1-206ENST00000466591 SLC35E1Q96K37 410 aa12.82□□□□□ -0.36
COL7A1-206ENST00000466591 U3KQ87 197 aa12.82□□□□□ -0.36
COL7A1-206ENST00000466591 CCDC160A6NGH7 325 aa12.81□□□□□ -0.36
COL7A1-206ENST00000466591 ZFP92A6NM28 416 aa12.81□□□□□ -0.36
COL7A1-206ENST00000466591 FABP1P07148 127 aa12.81□□□□□ -0.36
COL7A1-206ENST00000466591 PYDC2Q56P42 97 aa12.81□□□□□ -0.36
COL7A1-206ENST00000466591 TRPT1Q86TN4 253 aaKnown RBP12.81□□□□□ -0.36
COL7A1-206ENST00000466591 A0A0B4J2A0 478 aa12.8□□□□□ -0.36
COL7A1-206ENST00000466591 TOMM40O96008 361 aa12.8□□□□□ -0.36
COL7A1-206ENST00000466591 VAMP1P23763 118 aa12.8□□□□□ -0.36
COL7A1-206ENST00000466591 KLF9Q13886 244 aaPredicted RBP12.8□□□□□ -0.36
COL7A1-206ENST00000466591 C16orf54Q6UWD8 224 aa12.8□□□□□ -0.36
COL7A1-206ENST00000466591 SIGLEC15Q6ZMC9 328 aa12.8□□□□□ -0.36
COL7A1-206ENST00000466591 LYZL2Q7Z4W2 148 aa12.8□□□□□ -0.36
COL7A1-206ENST00000466591 RBKSQ9H477 322 aa12.8□□□□□ -0.36
COL7A1-206ENST00000466591 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
COL7A1-206ENST00000466591 IGLL5B9A064 214 aa12.79□□□□□ -0.36
COL7A1-206ENST00000466591 MIFP14174 115 aa12.79□□□□□ -0.36
COL7A1-206ENST00000466591 S100A5P33763 92 aa12.79□□□□□ -0.36
COL7A1-206ENST00000466591 RAB11AP62491 216 aa12.79□□□□□ -0.36
COL7A1-206ENST00000466591 USF2Q15853 346 aaPredicted RBP12.79□□□□□ -0.36
COL7A1-206ENST00000466591 NMSQ5H8A3 153 aa12.79□□□□□ -0.36
COL7A1-206ENST00000466591 LGALS9CQ6DKI2 356 aa12.79□□□□□ -0.36
COL7A1-206ENST00000466591 OR51G1Q8NGK1 321 aa12.79□□□□□ -0.36
COL7A1-206ENST00000466591 DCANP1Q8TF63 244 aa12.79□□□□□ -0.36
COL7A1-206ENST00000466591 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms