RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 F6UZH7 168 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 CLN5O75503 358 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 SNRPCP09234 159 aaKnown RBP10.74□□□□□ -0.69
UBE4B-206ENST00000466379 C8orf88P0DMB2 117 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 CTRB1P17538 263 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 ORM2P19652 201 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 C10orf113Q5VZT2 155 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 CTRB2Q6GPI1 263 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 C16orf82Q7Z2V1 217 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 Q8N6K4 173 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 C10orf105Q8TEF2 133 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 FAM167A-AS1Q96KT0 104 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 SAV1Q9H4B6 383 aaPredicted RBP10.74□□□□□ -0.69
UBE4B-206ENST00000466379 ZNF355PQ9NSJ1 428 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 ZFHX3Q15911 3703 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 IGHV4-30-2A0A087WSY4 118 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 OOSP1A8MZH6 123 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 I3L2K1 104 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 CORTO00230 105 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 HNF1AP20823 631 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 TAS2R45P59539 299 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 SRSF1Q07955 248 aaKnown RBP eCLIP10.74□□□□□ -0.69
UBE4B-206ENST00000466379 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 NECAP1Q8NC96 275 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 TMEM116Q8NCL8 245 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 OR5AU1Q8NGC0 362 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 OR1B1Q8NGR6 318 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 C22orf15Q8WYQ4 148 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 C19orf24Q9BVV8 132 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 TBL2Q9Y4P3 447 aaKnown RBP10.74□□□□□ -0.69
UBE4B-206ENST00000466379 S4R3C0 116 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 CRYBG3Q68DQ2 2970 aa10.74□□□□□ -0.69
UBE4B-206ENST00000466379 NDUFS6O75380 124 aaKnown RBP10.73□□□□□ -0.69
UBE4B-206ENST00000466379 PYYP10082 97 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 CX3CL1P78423 397 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 SMUG1Q53HV7 270 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 ASPHD1Q5U4P2 390 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 MRPL32Q9BYC8 188 aaKnown RBP10.73□□□□□ -0.69
UBE4B-206ENST00000466379 TMEM167BQ9NRX6 74 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 KLF2Q9Y5W3 355 aaPredicted RBP10.73□□□□□ -0.69
UBE4B-206ENST00000466379 TRBV20OR9-2A0A075B6H5 130 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 C1orf196B1AJZ1 125 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 CLDN34H7C241 214 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 GOSR1O95249 250 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 RPS10P46783 165 aaKnown RBP10.73□□□□□ -0.69
UBE4B-206ENST00000466379 SELENOTP62341 195 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 EBI3Q14213 229 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 CLEC2AQ6UVW9 174 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 OR1L4Q8NGR5 311 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 MALSU1Q96EH3 234 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 PFDN5Q99471 154 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 TRGV9Q99603 122 aa10.73□□□□□ -0.69
UBE4B-206ENST00000466379 ABCA1O95477 2261 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 CSMD2Q7Z408 3487 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 CENPVL3A0A0U1RRI6 287 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 CXorf65A6NEN9 183 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 NPFFO15130 113 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 RAB5BP61020 215 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 UBE2L3P68036 154 aaKnown RBP10.72□□□□□ -0.69
UBE4B-206ENST00000466379 LINC00305Q7Z4B0 112 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 ARPC1AQ92747 370 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 SPG11Q96JI7 2443 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 VWC2LB2RUY7 222 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 K7EIM0 57 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 TIGITQ495A1 244 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 LINC01551Q86U37 167 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 TXNDC17Q9BRA2 123 aa10.72□□□□□ -0.69
UBE4B-206ENST00000466379 SRSF8Q9BRL6 282 aaKnown RBP10.72□□□□□ -0.69
UBE4B-206ENST00000466379 GGTLC3B5MD39 225 aa10.71□□□□□ -0.69
UBE4B-206ENST00000466379 CRYBB3P26998 211 aa10.71□□□□□ -0.69
UBE4B-206ENST00000466379 CLEC12BQ2HXU8 276 aa10.71□□□□□ -0.69
UBE4B-206ENST00000466379 ZNF562Q6V9R5 426 aa10.71□□□□□ -0.69
UBE4B-206ENST00000466379 Q8N9W7 124 aa10.71□□□□□ -0.69
UBE4B-206ENST00000466379 RNF2Q99496 336 aa10.71□□□□□ -0.69
UBE4B-206ENST00000466379 ELOVL1Q9BW60 279 aa10.71□□□□□ -0.69
UBE4B-206ENST00000466379 SH2D7A6NKC9 451 aaPredicted RBP10.7□□□□□ -0.7
UBE4B-206ENST00000466379 IGLC1P0CG04 106 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 FAM106CPP0CH98 169 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 PF4V1P10720 104 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 PAX8Q06710 450 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 PAXXQ9BUH6 204 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 CTDSP1Q9GZU7 261 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 TMEM242Q9NWH2 141 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 H7BYZ3 331 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 LEMD1Q68G75 181 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 BRD3OSQ6XYD6 125 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 POLR3KQ9Y2Y1 108 aaPredicted RBP10.7□□□□□ -0.7
UBE4B-206ENST00000466379 CELSR1Q9NYQ6 3014 aa10.7□□□□□ -0.7
UBE4B-206ENST00000466379 IGHV7-81A0A0B4J1V7 117 aa10.69□□□□□ -0.7
UBE4B-206ENST00000466379 PSG1P11464 419 aa10.69□□□□□ -0.7
UBE4B-206ENST00000466379 RPL35P42766 123 aaKnown RBP10.69□□□□□ -0.7
UBE4B-206ENST00000466379 LYZP61626 148 aa10.69□□□□□ -0.7
UBE4B-206ENST00000466379 SUMO1P63165 101 aaKnown RBP10.69□□□□□ -0.7
UBE4B-206ENST00000466379 C11orf52Q96A22 123 aa10.69□□□□□ -0.7
UBE4B-206ENST00000466379 HSPB9Q9BQS6 159 aa10.69□□□□□ -0.7
UBE4B-206ENST00000466379 OR51M1Q9H341 326 aa10.69□□□□□ -0.7
UBE4B-206ENST00000466379 EPG5Q9HCE0 2579 aa10.69□□□□□ -0.7
UBE4B-206ENST00000466379 TRAV40A0A0B4J280 105 aa10.69□□□□□ -0.7
UBE4B-206ENST00000466379 EGR2P11161 476 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms