RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ANKRD34BA5PLL1 514 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 PPP5D1E7EU14 171 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 TGOLN2O43493 480 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 CLEC3BP05452 202 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 CTSGP08311 255 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 NPBWR1P48145 328 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 OR2F1Q13607 317 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 CLINT1Q14677 625 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 ATP6V1FQ16864 119 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 Q56UQ5 140 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 C12orf54Q6X4T0 127 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 LILRB2Q8N423 598 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 ACY3Q96HD9 319 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 RAX2Q96IS3 184 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 HYLS1Q96M11 299 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 ATP5SQ99766 215 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 MFFQ9GZY8 342 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 PEF1Q9UBV8 284 aaKnown RBP8.57□□□□□ -1.04
VCP-204ENST00000466100 WDR83OSQ9Y284 106 aa8.57□□□□□ -1.04
VCP-204ENST00000466100 UBE2L5PA0A1B0GUS4 154 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 NUDT19A8MXV4 375 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 PFDN1O60925 122 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 HSPB1P04792 205 aaKnown RBP8.56□□□□□ -1.04
VCP-204ENST00000466100 OR10J1P30954 320 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 ARL3P36405 182 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 NUP62P37198 522 aaPredicted RBP8.56□□□□□ -1.04
VCP-204ENST00000466100 EIF2B2P49770 351 aaKnown RBP8.56□□□□□ -1.04
VCP-204ENST00000466100 NSUN5P1Q3KNT7 163 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 LGALSLQ3ZCW2 172 aaPredicted RBP8.56□□□□□ -1.04
VCP-204ENST00000466100 LAMTOR1Q6IAA8 161 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 SPSB3Q6PJ21 355 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 C9orf62Q8N4C0 152 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 C3orf56Q8N813 242 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 UBAC2Q8NBM4 344 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 TRGV9Q99603 122 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 SMIM3Q9BZL3 60 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 NPVFQ9HCQ7 196 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 ZC4H2Q9NQZ6 224 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 GAR1Q9NY12 217 aaKnown RBP8.56□□□□□ -1.04
VCP-204ENST00000466100 NBEAL1Q6ZS30 2694 aa8.56□□□□□ -1.04
VCP-204ENST00000466100 TRAV30A0A087WSZ9 112 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 SMCO3A2RU48 225 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 BOLA2-SMG1P6H3BVE0 249 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 GNG7O60262 68 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 DFFBO76075 338 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 AP2S1P53680 142 aaPredicted RBP8.55□□□□□ -1.04
VCP-204ENST00000466100 AKR1C1Q04828 323 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 TIGITQ495A1 244 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 SHISA2Q6UWI4 295 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 OR11H1Q8NG94 326 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 DUX3Q96PT4 197 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 MGST2Q99735 147 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 PARD6GQ9BYG4 376 aaPredicted RBP8.55□□□□□ -1.04
VCP-204ENST00000466100 CYTL1Q9NRR1 136 aa8.55□□□□□ -1.04
VCP-204ENST00000466100 NOTCH3Q9UM47 2321 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 A0A0D9SG52 128 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 LINC01619G3V211 115 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 CCL24O00175 119 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 GGCTO75223 188 aaKnown RBP8.54□□□□□ -1.04
VCP-204ENST00000466100 HOXD3P31249 432 aaPredicted RBP8.54□□□□□ -1.04
VCP-204ENST00000466100 NKX2-5P52952 324 aaPredicted RBP8.54□□□□□ -1.04
VCP-204ENST00000466100 YPEL3P61236 119 aaPredicted RBP8.54□□□□□ -1.04
VCP-204ENST00000466100 ZNF90Q03938 601 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 ZNF616Q08AN1 781 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 TEPPQ6URK8 271 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 TMEM182Q6ZP80 229 aaPredicted RBP8.54□□□□□ -1.04
VCP-204ENST00000466100 TMUB2Q71RG4 321 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 OR1N2Q8NGR9 330 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 GGTLC1Q9BX51 225 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 WDR61Q9GZS3 305 aaKnown RBP8.54□□□□□ -1.04
VCP-204ENST00000466100 ZFAND3Q9H8U3 227 aa8.54□□□□□ -1.04
VCP-204ENST00000466100 ZFP92A6NM28 416 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 TAAR5O14804 337 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 AGPAT2O15120 278 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 NUPL2O15504 423 aaKnown RBP8.53□□□□□ -1.04
VCP-204ENST00000466100 BCL2L11O43521 198 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 MPDU1O75352 247 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 OR2C1O95371 312 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 TOMM40O96008 361 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 FGF7P21781 194 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 SLURP1P55000 103 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 KLF5Q13887 457 aaPredicted RBP8.53□□□□□ -1.04
VCP-204ENST00000466100 OPCMLQ14982 345 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 RPL7L1Q6DKI1 246 aaKnown RBP8.53□□□□□ -1.04
VCP-204ENST00000466100 BTNL8Q6UX41 500 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 ZNF600Q6ZNG1 722 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 GPHB5Q86YW7 130 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 NPCDR1Q9BY65 106 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 ARL6Q9H0F7 186 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 SLC45A2Q9UMX9 530 aa8.53□□□□□ -1.04
VCP-204ENST00000466100 MGAM2Q2M2H8 2515 aa8.52□□□□□ -1.04
VCP-204ENST00000466100 IGHV3-35A0A0C4DH35 117 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 NDUFA4O00483 81 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 TSPAN15O95858 294 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 LINC00869P0C866 280 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 ZP3P21754 424 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 MYCNOSP40205 109 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 PRR20EP86478 221 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 PRR20CP86479 221 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 PRR20DP86480 221 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms