RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 FAM220BPB1ANY3 271 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 NDUFC2-KCTD14E9PQ53 114 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 F5H5P2 479 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 H7C1H1 209 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 J3QT63 122 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 GEMIN2O14893 280 aaKnown RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 ANGPTL7O43827 346 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 ARL6IP5O75915 188 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 DUSP14O95147 198 aaKnown RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 CYB5AP00167 134 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 GYPAP02724 150 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 FCGR3AP08637 254 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 SLC25A6P12236 298 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 ASIPP42127 132 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 LIM2P55344 173 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 RBM11P57052 281 aaKnown RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 HLA-DRB3P79483 266 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 C1DQ13901 141 aaKnown RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 MSMO1Q15800 293 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 GSG1Q2KHT4 349 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 VMA21Q3ZAQ7 101 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 BVES-AS1Q5T3Y7 98 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 ZNF57Q68EA5 555 aaPredicted RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 DGAT2L6Q6ZPD8 337 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 SHISA6Q6ZSJ9 500 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 C10orf111Q8N326 155 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 ZFP41Q8N8Y5 198 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 ZFP62Q8NB50 900 aaPredicted RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 OR4X2Q8NGF9 303 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 OR52N5Q8NH56 324 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 VSTM2AQ8TAG5 236 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 ZNF689Q96CS4 500 aaPredicted RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 MS4A6EQ96DS6 147 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 C18orf12Q96KH6 178 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 MCEEQ96PE7 176 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 OPRPNQ99935 248 aaPredicted RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 TM2D3Q9BRN9 247 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 OVOL2Q9BRP0 275 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 FGF22Q9HCT0 170 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 RPS10P5Q9NQ39 176 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 NDUFB11Q9NX14 153 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 C21orf62Q9NYP8 219 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 RBM12B-AS1Q9P1G2 102 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 RARRES3Q9UL19 164 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 ZNF256Q9Y2P7 627 aaPredicted RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 AMMECR1Q9Y4X0 333 aaPredicted RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 ADGRB1O14514 1584 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 AGLP35573 1532 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 PCNX2A6NKB5 2137 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 PIKFYVEQ9Y2I7 2098 aa2.51□□□□□ -2.01
SNX4-202ENST00000465505 COL5A3P25940 1745 aaPredicted RBP2.51□□□□□ -2.01
SNX4-202ENST00000465505 MYO9BQ13459 2157 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 BAZ2BQ9UIF8 2168 aaKnown RBP2.5□□□□□ -2.01
SNX4-202ENST00000465505 TSC2P49815 1807 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 ATAD5Q96QE3 1844 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 ARFGEF1Q9Y6D6 1849 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 DOCK11Q5JSL3 2073 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 TRAV27A0A087WT01 109 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 TRAV8-2A0A0B4J237 113 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 A0A0J9YWU9 116 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 C3orf85A0A1B0GTC6 90 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 FAM236AA0A1B0GUQ0 79 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 FAM236BA0A1B0GV22 79 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 C15orf62A8K5M9 175 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 GABARAPH6UMI1 98 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 M0R1X1 148 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 PIRO00625 290 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 GSTZ1O43708 216 aaPredicted RBP2.5□□□□□ -2.01
SNX4-202ENST00000465505 NDUFB6O95139 128 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 PTHP01270 115 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 ATP1B1P05026 303 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 SFTA3P0C7M3 94 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 PPIBP23284 216 aaKnown RBP2.5□□□□□ -2.01
SNX4-202ENST00000465505 HLA-DMBP28068 263 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 RPL22P35268 128 aaKnown RBP2.5□□□□□ -2.01
SNX4-202ENST00000465505 RBMXP38159 391 aaKnown RBP2.5□□□□□ -2.01
SNX4-202ENST00000465505 VDAC2P45880 294 aaPredicted RBP2.5□□□□□ -2.01
SNX4-202ENST00000465505 HINT1P49773 126 aaPredicted RBP2.5□□□□□ -2.01
SNX4-202ENST00000465505 KLK7P49862 253 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 CSRP3P50461 194 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 MTPNP58546 118 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 B3GALT5-AS1P59052 145 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 PPP1CAP62136 330 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 ZNF90Q03938 601 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 FOXF1Q12946 379 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 TGIF1Q15583 401 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 TTC32Q5I0X7 151 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 FAM182AQ5T1J6 154 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 SPINK14Q6IE38 97 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 LCN8Q6JVE9 175 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 ZNF730Q6ZMV8 503 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 ZNF493Q6ZR52 646 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 H2AFVQ71UI9 128 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 AAED1Q7RTV5 226 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 COMMD6Q7Z4G1 85 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 VN1R4Q7Z5H5 301 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 LINC00471Q8N535 108 aa2.5□□□□□ -2.01
SNX4-202ENST00000465505 ANKRD29Q8N6D5 301 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms