RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 SNRPGP15A8MWD9 76 aa9.07□□□□□ -0.96
APTX-213ENST00000465003 ZNF207O43670 478 aaKnown RBP9.07□□□□□ -0.96
APTX-213ENST00000465003 PAX9P55771 341 aa9.07□□□□□ -0.96
APTX-213ENST00000465003 RAB32Q13637 225 aa9.07□□□□□ -0.96
APTX-213ENST00000465003 KLF5Q13887 457 aaPredicted RBP9.07□□□□□ -0.96
APTX-213ENST00000465003 OR1L6Q8NGR2 347 aa9.07□□□□□ -0.96
APTX-213ENST00000465003 ACY3Q96HD9 319 aa9.07□□□□□ -0.96
APTX-213ENST00000465003 RCC1LQ96I51 464 aaKnown RBP9.07□□□□□ -0.96
APTX-213ENST00000465003 ZNF414Q96IQ9 312 aa9.07□□□□□ -0.96
APTX-213ENST00000465003 C7orf66A4D0T2 115 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 FAM90A26D6RGX4 464 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 K7EPK0 472 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 GNG7O60262 68 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 TSC22D2O75157 780 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 GGCTO75223 188 aaKnown RBP9.06□□□□□ -0.96
APTX-213ENST00000465003 IFNA7P01567 189 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 FABP1P07148 127 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 CTSGP08311 255 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 CXCL3P19876 107 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 RND2P52198 227 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 SAMD5Q5TGI4 173 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 PRSS54Q6PEW0 395 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 C2orf50Q96LR7 162 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 PSENENQ9NZ42 101 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 MGAT4CQ9UBM8 478 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 MEGF8Q7Z7M0 2845 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 RPS10-NUDT3A0A1W2PQS6 291 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 MED6O75586 246 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 METTL15P1P0C7V9 234 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 MFAP4P55083 255 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 BTN1A1Q13410 526 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 TM4SF20Q53R12 229 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 PVRIGQ6DKI7 326 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 LAMTOR1Q6IAA8 161 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 OR8G2PQ6IF36 304 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 OR9G4Q8NGQ1 327 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 C20orf24Q9BUV8 137 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 FBN3Q75N90 2809 aa9.06□□□□□ -0.96
APTX-213ENST00000465003 IGHV3-49A0A0A0MS15 119 aa9.05□□□□□ -0.96
APTX-213ENST00000465003 YIF1AO95070 293 aa9.05□□□□□ -0.96
APTX-213ENST00000465003 H2AFB1P0C5Y9 115 aa9.05□□□□□ -0.96
APTX-213ENST00000465003 KRTAP10-11P60412 298 aa9.05□□□□□ -0.96
APTX-213ENST00000465003 IL34Q6ZMJ4 242 aa9.05□□□□□ -0.96
APTX-213ENST00000465003 SLC16A13Q7RTY0 426 aa9.05□□□□□ -0.96
APTX-213ENST00000465003 NPIPB3Q92617 1050 aa9.05□□□□□ -0.96
APTX-213ENST00000465003 BSCL2Q96G97 398 aaPredicted RBP9.05□□□□□ -0.96
APTX-213ENST00000465003 SAV1Q9H4B6 383 aaPredicted RBP9.05□□□□□ -0.96
APTX-213ENST00000465003 HSPB11Q9Y547 144 aa9.05□□□□□ -0.96
APTX-213ENST00000465003 IGHV3OR16-13A0A075B7E8 117 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 IGHV3-74A0A0B4J1X5 117 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 CORTO00230 105 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 NUPL2O15504 423 aaKnown RBP9.04□□□□□ -0.96
APTX-213ENST00000465003 NUP62P37198 522 aaPredicted RBP9.04□□□□□ -0.96
APTX-213ENST00000465003 RRAS2P62070 204 aaPredicted RBP9.04□□□□□ -0.96
APTX-213ENST00000465003 FCN2Q15485 313 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 ADAMTSL5Q6ZMM2 481 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 C9orf62Q8N4C0 152 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 OR11H7Q8NGC8 314 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 ST8SIA2Q92186 375 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 S100A8P05109 93 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 S100PP25815 95 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 CAV2P51636 162 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 CD69Q07108 199 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 IL15RAQ13261 267 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 TIGITQ495A1 244 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 ACOT7LQ6ZUV0 252 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 RNASEH2CQ8TDP1 164 aaKnown RBP9.04□□□□□ -0.96
APTX-213ENST00000465003 CIB3Q96Q77 187 aaPredicted RBP9.04□□□□□ -0.96
APTX-213ENST00000465003 BIN3Q9NQY0 253 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 OR5AC2Q9NZP5 309 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 STRAPQ9Y3F4 350 aaKnown RBP9.04□□□□□ -0.96
APTX-213ENST00000465003 CBY1Q9Y3M2 126 aa9.04□□□□□ -0.96
APTX-213ENST00000465003 FAM24AA6NFZ4 105 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 PRSS46E5RG02 174 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 ARL16Q0P5N6 197 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 GAMTQ14353 236 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 CACFD1Q9UGQ2 172 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 UBQLN2Q9UHD9 624 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 TMEM213A2RRL7 107 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 SMCO3A2RU48 225 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 H0YIZ8 118 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 L7N2F9 121 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 CST7O76096 145 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 IGKV1-17P01599 117 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 CSN3P07498 182 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 NPBWR1P48145 328 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 RAB4BP61018 213 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 RAB11AP62491 216 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 VAMP2P63027 116 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 DEFA6Q01524 100 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 TMEM217Q8N7C4 229 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 OR4X1Q8NH49 305 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 PPP1R1CQ8WVI7 109 aa9.03□□□□□ -0.96
APTX-213ENST00000465003 PUS1Q9Y606 427 aaKnown RBP eCLIP9.03□□□□□ -0.96
APTX-213ENST00000465003 DNAH3Q8TD57 4116 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 IGKV1OR2-108A0A075B7D4 117 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 IGHV3-66A0A0C4DH42 116 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 IZUMO1RA6ND01 250 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 C2orf70A6NJV1 201 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms