RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ALKBH7Q9BT30 221 aaPredicted RBP7.5□□□□□ -1.21
HPS4-208ENST00000464362 SFXN3Q9BWM7 321 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 ANAPC10Q9UM13 185 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 TECTAO75443 2155 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 CHD3Q12873 2000 aaKnown RBP7.5□□□□□ -1.21
HPS4-208ENST00000464362 UPK2O00526 184 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 NUDT3O95989 172 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 STAG3L2P0CL84 134 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 STAG3L3P0CL85 134 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 RPL7P18124 248 aaKnown RBP7.49□□□□□ -1.21
HPS4-208ENST00000464362 CA7P43166 264 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 SCGB1D4Q6XE38 83 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 C1orf174Q8IYL3 243 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 TMEM186Q96B77 213 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 RNF115Q9Y4L5 304 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 SS18L1O75177 396 aaPredicted RBP7.49□□□□□ -1.21
HPS4-208ENST00000464362 IGHV2-70P01814 119 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 IGKV1-16P04430 117 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 SLC25A34Q6PIV7 304 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 UNQ5815/PRO19632Q6UWF5 114 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 WDR86Q86TI4 376 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 A0A1B0GWJ7 208 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 HBBP68871 147 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 Q1RN00 199 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 C2orf83Q53S99 150 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 COLCA1Q6ZS62 124 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 RPRMLQ8N4K4 120 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 LOXL4Q96JB6 756 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 MCRIP2Q9BUT9 160 aaKnown RBP7.49□□□□□ -1.21
HPS4-208ENST00000464362 CLEC7AQ9BXN2 247 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 AP5S1Q9NUS5 200 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 CHD9Q3L8U1 2897 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 C17orf100A8MU93 164 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 SCGB1C2P0DMR2 95 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 GCSHP23434 173 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 LYPD6Q86Y78 171 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 SORL1Q92673 2214 aa7.49□□□□□ -1.21
HPS4-208ENST00000464362 IGKV1D-17A0A075B6S4 117 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 TRAV8-1A0A0A6YYK1 113 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 FOXI3A8MTJ6 420 aaPredicted RBP7.48□□□□□ -1.21
HPS4-208ENST00000464362 GFRA3O60609 400 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 IGHV1-46P01743 117 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 DUX4L9Q6RFH8 374 aaPredicted RBP7.48□□□□□ -1.21
HPS4-208ENST00000464362 HAPLN4Q86UW8 402 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 C1RLQ9NZP8 487 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 M0QZ24 198 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 LINC00614P0C842 121 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 CD69Q07108 199 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 WDR31Q8NA23 367 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 TMEM70Q9BUB7 260 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 PIEZO1Q92508 2521 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 KLF17Q5JT82 389 aaPredicted RBP7.48□□□□□ -1.21
HPS4-208ENST00000464362 TMEM136Q6ZRR5 245 aa7.48□□□□□ -1.21
HPS4-208ENST00000464362 UNC80Q8N2C7 3258 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 LY6HO94772 140 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 ZNF883P0CG24 379 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 TMEM208Q9BTX3 173 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 MRPL32Q9BYC8 188 aaKnown RBP7.47□□□□□ -1.21
HPS4-208ENST00000464362 PRDM13Q9H4Q3 707 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 PPIFP30405 207 aaKnown RBP7.47□□□□□ -1.21
HPS4-208ENST00000464362 ZNF114Q8NC26 417 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 C1orf162Q8NEQ5 155 aaPredicted RBP7.47□□□□□ -1.21
HPS4-208ENST00000464362 ZNF502Q8TBZ5 544 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 Q9H3A6 140 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 TMEM242Q9NWH2 141 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 HLA-DRB1P01911 266 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 APOHP02749 345 aaPredicted RBP7.47□□□□□ -1.21
HPS4-208ENST00000464362 FGF23Q9GZV9 251 aaPredicted RBP7.47□□□□□ -1.21
HPS4-208ENST00000464362 NCOR1P1Q9H4R4 102 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 A0A1B0GW64 132 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 LY6EQ16553 131 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 TMEM97Q5BJF2 176 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 GPR82Q96P67 336 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 DIRC2Q96SL1 478 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 C19orf24Q9BVV8 132 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 ELOVL5Q9NYP7 299 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 LINC00312Q9Y6C7 94 aa7.47□□□□□ -1.21
HPS4-208ENST00000464362 C2orf16Q68DN1 1984 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 TNRC18O15417 2968 aaPredicted RBP7.46□□□□□ -1.21
HPS4-208ENST00000464362 C7orf71A4D174 169 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 GAGE10A6NGK3 116 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 OR2T8A6NH00 312 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 EREGO14944 169 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 PFN1P07737 140 aaKnown RBP7.46□□□□□ -1.21
HPS4-208ENST00000464362 ZNF138P52744 262 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 MFAP4P55083 255 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 PRCDQ00LT1 54 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 SRSF9Q13242 221 aaKnown RBP eCLIP7.46□□□□□ -1.21
HPS4-208ENST00000464362 C10orf91Q5T1B1 145 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 C19orf35Q6ZS72 473 aa7.46□□□□□ -1.21
HPS4-208ENST00000464362 RPUSD1Q9UJJ7 312 aaKnown RBP7.46□□□□□ -1.21
HPS4-208ENST00000464362 NACAE9PAV3 2078 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 ZNF324O75467 553 aaPredicted RBP7.46□□□□□ -1.22
HPS4-208ENST00000464362 IGKV3-20P01619 116 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 IGKV3-15P01624 115 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 IGHV2-5P01817 119 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 PF4V1P10720 104 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 FXYD7P58549 80 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 DMRTC2Q8IXT2 367 aaPredicted RBP7.46□□□□□ -1.22
HPS4-208ENST00000464362 MDS2Q8NDY4 140 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms