RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 ENY2Q9NPA8 101 aa12.36□□□□□ -0.43
HMGN1-210ENST00000464078 NRN1Q9NPD7 142 aa12.36□□□□□ -0.43
HMGN1-210ENST00000464078 XCL2Q9UBD3 114 aa12.36□□□□□ -0.43
HMGN1-210ENST00000464078 RPS10-NUDT3A0A1W2PQS6 291 aa12.35□□□□□ -0.43
HMGN1-210ENST00000464078 SPART-AS1P0CW21 52 aa12.35□□□□□ -0.43
HMGN1-210ENST00000464078 MLANAQ16655 118 aa12.35□□□□□ -0.43
HMGN1-210ENST00000464078 C3orf85A0A1B0GTC6 90 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 TEX48A0A1B0GUV7 120 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 SMIM9A6NGZ8 99 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 IFNA10P01566 189 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 SLC25A4P12235 298 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 PGAM2P15259 253 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 PRSS54Q6PEW0 395 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 Q6ZRM9 215 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 Q8WTZ3 238 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 HLA-DRB4X5D2U9 266 aa12.34□□□□□ -0.43
HMGN1-210ENST00000464078 HSPG2P98160 4391 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 A0A0G2JRQ6 117 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 SMIM31A0A1B0GVY4 71 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 M0QYG6 137 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 BUB3O43684 328 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 GSTZ1O43708 216 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-210ENST00000464078 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 IFNA21P01568 189 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 PI3P19957 117 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 UCP1P25874 307 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 OR10J1P30954 320 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 HTR2BP41595 481 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 RND2P52198 227 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 SPCS3P61009 180 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 USF2Q15853 346 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-210ENST00000464078 RNF212Q495C1 297 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 SOHLH1Q5JUK2 328 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 SNX29P2Q8IUI4 249 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 UBE2DNLQ8IWF7 75 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 RNASEH2CQ8TDP1 164 aaKnown RBP12.33□□□□□ -0.44
HMGN1-210ENST00000464078 RRNAD1Q96FB5 475 aaKnown RBP12.33□□□□□ -0.44
HMGN1-210ENST00000464078 KRTAP4-5Q9BYR2 181 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 NACAE9PAV3 2078 aa12.33□□□□□ -0.44
HMGN1-210ENST00000464078 NKX2-1P43699 371 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-210ENST00000464078 DHODHQ02127 395 aa12.32□□□□□ -0.44
HMGN1-210ENST00000464078 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
HMGN1-210ENST00000464078 C2orf83Q53S99 150 aa12.32□□□□□ -0.44
HMGN1-210ENST00000464078 SIGLEC15Q6ZMC9 328 aa12.32□□□□□ -0.44
HMGN1-210ENST00000464078 ZNF575Q86XF7 245 aa12.32□□□□□ -0.44
HMGN1-210ENST00000464078 FAM219AQ8IW50 185 aa12.32□□□□□ -0.44
HMGN1-210ENST00000464078 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
HMGN1-210ENST00000464078 IL4P05112 153 aa12.31□□□□□ -0.44
HMGN1-210ENST00000464078 TBPP20226 339 aa12.31□□□□□ -0.44
HMGN1-210ENST00000464078 OXA1LQ15070 435 aa12.31□□□□□ -0.44
HMGN1-210ENST00000464078 RNASE10Q5GAN6 216 aaKnown RBP12.31□□□□□ -0.44
HMGN1-210ENST00000464078 CCDC71LQ8N9Z2 235 aa12.31□□□□□ -0.44
HMGN1-210ENST00000464078 YIPF6Q96EC8 236 aa12.31□□□□□ -0.44
HMGN1-210ENST00000464078 COMMD3Q9UBI1 195 aa12.31□□□□□ -0.44
HMGN1-210ENST00000464078 DKK2Q9UBU2 259 aa12.31□□□□□ -0.44
HMGN1-210ENST00000464078 RFNGQ9Y644 331 aa12.31□□□□□ -0.44
HMGN1-210ENST00000464078 IGLV2-18A0A075B6J9 118 aa12.3□□□□□ -0.44
HMGN1-210ENST00000464078 RNASE11Q8TAA1 199 aaKnown RBP12.3□□□□□ -0.44
HMGN1-210ENST00000464078 HEYLQ9NQ87 328 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-210ENST00000464078 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-210ENST00000464078 COPZ2Q9P299 210 aa12.3□□□□□ -0.44
HMGN1-210ENST00000464078 CDS2O95674 445 aa12.29□□□□□ -0.44
HMGN1-210ENST00000464078 TOMM40O96008 361 aa12.29□□□□□ -0.44
HMGN1-210ENST00000464078 ELK1P19419 428 aa12.29□□□□□ -0.44
HMGN1-210ENST00000464078 NUP62P37198 522 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-210ENST00000464078 LSM3P62310 102 aaKnown RBP12.29□□□□□ -0.44
HMGN1-210ENST00000464078 SP6Q3SY56 376 aa12.29□□□□□ -0.44
HMGN1-210ENST00000464078 SLC24A4Q8NFF2 622 aa12.29□□□□□ -0.44
HMGN1-210ENST00000464078 ZFAND1Q8TCF1 268 aa12.29□□□□□ -0.44
HMGN1-210ENST00000464078 NIPSNAP3BQ9BS92 247 aa12.29□□□□□ -0.44
HMGN1-210ENST00000464078 TMEM222Q9H0R3 208 aa12.29□□□□□ -0.44
HMGN1-210ENST00000464078 ATP6V1G2O95670 118 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 CD3DP04234 171 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 EMP1P54849 157 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 C1orf134Q5TEV5 83 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 GDF5OSQ5U4N7 250 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 FAM222AQ5U5X8 452 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 ETFRF1Q6IPR1 90 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 FOXI2Q6ZQN5 318 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 ZNF709Q8N972 641 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 OR13C8Q8NGS7 320 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 TMEM170AQ8WVE7 144 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 ABHD1Q96SE0 405 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 SAV1Q9H4B6 383 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-210ENST00000464078 KLK11Q9UBX7 282 aa12.28□□□□□ -0.44
HMGN1-210ENST00000464078 NXPH3O95157 252 aa12.27□□□□□ -0.45
HMGN1-210ENST00000464078 RD3LP0DJH9 198 aa12.27□□□□□ -0.45
HMGN1-210ENST00000464078 FAM3BP58499 235 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-210ENST00000464078 TERB2Q8NHR7 220 aa12.27□□□□□ -0.45
HMGN1-210ENST00000464078 MTFP1Q9UDX5 166 aa12.27□□□□□ -0.45
HMGN1-210ENST00000464078 CDK2AP2O75956 126 aa12.26□□□□□ -0.45
HMGN1-210ENST00000464078 PSMB3P49720 205 aa12.26□□□□□ -0.45
HMGN1-210ENST00000464078 ZNF79Q15937 498 aa12.26□□□□□ -0.45
HMGN1-210ENST00000464078 SPATA31B1PQ5VZV4 182 aa12.26□□□□□ -0.45
HMGN1-210ENST00000464078 LHFPL5Q8TAF8 219 aa12.26□□□□□ -0.45
HMGN1-210ENST00000464078 NPIPB3Q92617 1050 aa12.26□□□□□ -0.45
HMGN1-210ENST00000464078 RBPMSQ93062 196 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms