RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ZNF391Q9UJN7 358 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 PARP4Q9UKK3 1724 aaKnown RBP2.04□□□□□ -2.08
USH2A-203ENST00000463147 SETBP1Q9Y6X0 1596 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 CLTCQ00610 1675 aaKnown RBP2.03□□□□□ -2.08
USH2A-203ENST00000463147 PREX2Q70Z35 1606 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 RAPGEF6Q8TEU7 1601 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 ABCA8O94911 1581 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 TRPM2O94759 1503 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 ZNF609O15014 1411 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 C10orf71Q711Q0 1435 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 TMEM269A0A1B0GVZ9 245 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 FAM159BA6NKW6 160 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 TMEM238C9JI98 176 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 TP53I11O14683 189 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 PSCAO43653 123 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 SNAPC5O75971 98 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 IGKV1-17P01599 117 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 IGLV6-57P01721 117 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 CPMP14384 443 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 KCNE1P15382 129 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 OGNP20774 298 aaKnown RBP2.03□□□□□ -2.08
USH2A-203ENST00000463147 CD200P41217 278 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 ARPP19P56211 112 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 AP1S1P61966 158 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 RPL30P62888 115 aaKnown RBP2.03□□□□□ -2.08
USH2A-203ENST00000463147 SMCO1Q147U7 214 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 GRK1Q15835 563 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 ARHGAP11BQ3KRB8 267 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 Q6ZS49 121 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 SSX8Q7RTT4 187 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 TMED4Q7Z7H5 227 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 TAC4Q86UU9 113 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 SNX29P2Q8IUI4 249 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 C20orf196Q8IYI0 205 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 C8orf59Q8N0T1 100 aaPredicted RBP2.03□□□□□ -2.08
USH2A-203ENST00000463147 OR52L1Q8NGH7 329 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 GPR119Q8TDV5 335 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 NEK7Q8TDX7 302 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 SMCR5Q8TEV8 140 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 ZNF431Q8TF32 576 aaPredicted RBP2.03□□□□□ -2.08
USH2A-203ENST00000463147 SLC7A6Q92536 515 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 FGF13Q92913 245 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 HYLS1Q96M11 299 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 PFDN5Q99471 154 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 CCDC32Q9BV29 185 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 CCDC90BQ9GZT6 254 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 NIT2Q9NQR4 276 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 C19orf12Q9NSK7 152 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 MCTS1Q9ULC4 181 aaKnown RBP2.03□□□□□ -2.08
USH2A-203ENST00000463147 HSPB11Q9Y547 144 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 DLG5Q8TDM6 1919 aa2.03□□□□□ -2.08
USH2A-203ENST00000463147 CCDC88AQ3V6T2 1871 aa2.03□□□□□ -2.09
USH2A-203ENST00000463147 FAM208AQ9UK61 1670 aaKnown RBP2.02□□□□□ -2.09
USH2A-203ENST00000463147 ADAMTS7Q9UKP4 1686 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 KIAA0556O60303 1618 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 PHRF1Q9P1Y6 1649 aaKnown RBP2.02□□□□□ -2.09
USH2A-203ENST00000463147 HIVEP2P31629 2446 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 MED1Q15648 1581 aaPredicted RBP2.02□□□□□ -2.09
USH2A-203ENST00000463147 ARHGAP5Q13017 1502 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 PRG4Q92954 1404 aaPredicted RBP2.02□□□□□ -2.09
USH2A-203ENST00000463147 DOCK3Q8IZD9 2030 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 IGKV1D-17A0A075B6S4 117 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 hADV38S2A0JD32 116 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 C11orf86A6NJI1 115 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 G3V2T6 193 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 KLRC4O43908 158 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 PDE6DO43924 150 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 IFNA10P01566 189 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 CTSGP08311 255 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 ZNF728P0DKX0 622 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 GZMBP10144 247 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 HLA-EP13747 358 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 XCL1P47992 114 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 PSMD8P48556 350 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 IAH1Q2TAA2 248 aaPredicted RBP2.02□□□□□ -2.09
USH2A-203ENST00000463147 Q5BKY6 102 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 TRIQKQ629K1 86 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 TEX261Q6UWH6 196 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 GDPD1Q8N9F7 314 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 OR51A2Q8NGJ7 313 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 OR13C8Q8NGS7 320 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 ZNF675Q8TD23 568 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 C1orf54Q8WWF1 131 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 ACOT12Q8WYK0 555 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 BORCS7Q96B45 105 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 HOPXQ9BPY8 73 aaPredicted RBP2.02□□□□□ -2.09
USH2A-203ENST00000463147 TMEM147Q9BVK8 224 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 OR8D2Q9GZM6 311 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 WDR61Q9GZS3 305 aaKnown RBP2.02□□□□□ -2.09
USH2A-203ENST00000463147 AICDAQ9GZX7 198 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 TMEM222Q9H0R3 208 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 C11orf68Q9H3H3 251 aaKnown RBP2.02□□□□□ -2.09
USH2A-203ENST00000463147 MED11Q9P086 117 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 SSR3Q9UNL2 185 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 U3KQ87 197 aa2.02□□□□□ -2.09
USH2A-203ENST00000463147 ZNF106Q9H2Y7 1883 aaKnown RBP2.02□□□□□ -2.09
USH2A-203ENST00000463147 SCN10AQ9Y5Y9 1956 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 C1orf167Q5SNV9 1468 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 CD163L1Q9NR16 1453 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 EDC4Q6P2E9 1401 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms