RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 CDS2O95674 445 aa11.6□□□□□ -0.55
SND1-203ENST00000463020 SCGB1D2O95969 90 aa11.6□□□□□ -0.55
SND1-203ENST00000463020 RPL12P30050 165 aaKnown RBP11.6□□□□□ -0.55
SND1-203ENST00000463020 GNRHRP30968 328 aa11.6□□□□□ -0.55
SND1-203ENST00000463020 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
SND1-203ENST00000463020 TBC1D26Q86UD7 250 aa11.6□□□□□ -0.55
SND1-203ENST00000463020 OSR1Q8TAX0 266 aaPredicted RBP11.6□□□□□ -0.55
SND1-203ENST00000463020 GLYATL2Q8WU03 294 aa11.6□□□□□ -0.55
SND1-203ENST00000463020 RRNAD1Q96FB5 475 aaKnown RBP11.6□□□□□ -0.55
SND1-203ENST00000463020 GPHA2Q96T91 129 aa11.6□□□□□ -0.55
SND1-203ENST00000463020 TMEM222Q9H0R3 208 aa11.6□□□□□ -0.55
SND1-203ENST00000463020 ZNF257Q9Y2Q1 563 aa11.6□□□□□ -0.55
SND1-203ENST00000463020 NPIPB5A8MRT5 1133 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 ST8SIA3O43173 380 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 C8orf88P0DMB2 117 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 PVALBP20472 110 aaPredicted RBP11.59□□□□□ -0.55
SND1-203ENST00000463020 FCGR2BP31994 310 aaPredicted RBP11.59□□□□□ -0.55
SND1-203ENST00000463020 ODF3L2Q3SX64 289 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 ZNF585BQ52M93 769 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 TMEM268Q5VZI3 342 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 MMD2Q8IY49 270 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 PHLDA1Q8WV24 401 aaPredicted RBP11.59□□□□□ -0.55
SND1-203ENST00000463020 RNF141Q8WVD5 230 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 IL22RA2Q969J5 263 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 CYTL1Q9NRR1 136 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 OR2W1Q9Y3N9 320 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 RBM7Q9Y580 266 aaKnown RBP11.59□□□□□ -0.55
SND1-203ENST00000463020 TMEM56-RWDD3S4R434 201 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 PKD1P98161 4303 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 DNAH11Q96DT5 4516 aa11.59□□□□□ -0.55
SND1-203ENST00000463020 BORCS7-ASMTA0A0B4J1R7 106 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 IGKV1D-13A0A0B4J2D9 117 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 MBPP02686 304 aaPredicted RBP11.58□□□□□ -0.56
SND1-203ENST00000463020 FGF2P09038 288 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 IGKV1-13P0DP09 117 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 RPL35AP18077 110 aaKnown RBP11.58□□□□□ -0.56
SND1-203ENST00000463020 BMI1P35226 326 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 P2RY1P47900 373 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 EIF4EBP1Q13541 118 aaPredicted RBP11.58□□□□□ -0.56
SND1-203ENST00000463020 FAM74A1Q5RGS3 127 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 LGALS9CQ6DKI2 356 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 Q6ZWC4 215 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 PUSL1Q8N0Z8 303 aaKnown RBP11.58□□□□□ -0.56
SND1-203ENST00000463020 OR1L6Q8NGR2 347 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 RNF183Q96D59 192 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 ADTRPQ96IZ2 230 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 TP53RKQ96S44 253 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 TP53TG1Q9Y2A0 90 aa11.58□□□□□ -0.56
SND1-203ENST00000463020 ACTL6BO94805 426 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 KBTBD11O94819 623 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 CLEC3BP05452 202 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 CRYGCP07315 174 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 CTRB1P17538 263 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 RPL27AP46776 148 aaKnown RBP11.57□□□□□ -0.56
SND1-203ENST00000463020 ZNF124Q15973 351 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 KLK9Q2XQG4 91 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 FAM209BQ5JX69 171 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 CTRB2Q6GPI1 263 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 ZNF818PQ6ZRF7 136 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 SELENOHQ8IZQ5 122 aaKnown RBP11.57□□□□□ -0.56
SND1-203ENST00000463020 SLC35G3Q8N808 338 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 KLK9Q9UKQ9 250 aa11.57□□□□□ -0.56
SND1-203ENST00000463020 KLK5Q9Y337 293 aaPredicted RBP11.57□□□□□ -0.56
SND1-203ENST00000463020 IGLV11-55A0A075B6I3 123 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 TEX46H3BTG2 121 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 PGLYRP1O75594 196 aaPredicted RBP11.56□□□□□ -0.56
SND1-203ENST00000463020 UCP1P25874 307 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 GPR183P32249 361 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 NANOS2P60321 138 aaKnown RBP11.56□□□□□ -0.56
SND1-203ENST00000463020 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 UQCC3Q6UW78 93 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 OR2C3Q8N628 320 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 ZNF645Q8N7E2 425 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 TMEM167AQ8TBQ9 72 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 GATAD1Q8WUU5 269 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 MARC2Q969Z3 335 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 EEF1AKMT3Q96AZ1 226 aa11.56□□□□□ -0.56
SND1-203ENST00000463020 RAB19A4D1S5 217 aa11.55□□□□□ -0.56
SND1-203ENST00000463020 SERPINE2P07093 398 aa11.55□□□□□ -0.56
SND1-203ENST00000463020 VAMP2P63027 116 aa11.55□□□□□ -0.56
SND1-203ENST00000463020 SSX9Q7RTT3 188 aa11.55□□□□□ -0.56
SND1-203ENST00000463020 OR4D5Q8NGN0 318 aa11.55□□□□□ -0.56
SND1-203ENST00000463020 TMED6Q8WW62 240 aa11.55□□□□□ -0.56
SND1-203ENST00000463020 SAT2Q96F10 170 aaPredicted RBP11.55□□□□□ -0.56
SND1-203ENST00000463020 ZNF414Q96IQ9 312 aa11.55□□□□□ -0.56
SND1-203ENST00000463020 FBXL17Q9UF56 701 aa11.55□□□□□ -0.56
SND1-203ENST00000463020 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
SND1-203ENST00000463020 IGHV3OR16-8A0A075B7F1 116 aa11.54□□□□□ -0.56
SND1-203ENST00000463020 ATF4P18848 351 aaPredicted RBP11.54□□□□□ -0.56
SND1-203ENST00000463020 M6PRP20645 277 aa11.54□□□□□ -0.56
SND1-203ENST00000463020 F2RP25116 425 aa11.54□□□□□ -0.56
SND1-203ENST00000463020 NKX2-1P43699 371 aaPredicted RBP11.54□□□□□ -0.56
SND1-203ENST00000463020 APOC4P55056 127 aa11.54□□□□□ -0.56
SND1-203ENST00000463020 BLOC1S1P78537 153 aa11.54□□□□□ -0.56
SND1-203ENST00000463020 RBPMS2Q6ZRY4 209 aaKnown RBP11.54□□□□□ -0.56
SND1-203ENST00000463020 LHFPL5Q8TAF8 219 aa11.54□□□□□ -0.56
SND1-203ENST00000463020 ZNF502Q8TBZ5 544 aa11.54□□□□□ -0.56
SND1-203ENST00000463020 SLC25A31Q9H0C2 315 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms