RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 GLRXP35754 106 aa13.1□□□□□ -0.31
SMC4-204ENST00000462787 PMS2CLQ68D20 193 aa13.1□□□□□ -0.31
SMC4-204ENST00000462787 A0A0G2JMM0 328 aa13.1□□□□□ -0.31
SMC4-204ENST00000462787 A0A1W2PPB8 328 aa13.1□□□□□ -0.31
SMC4-204ENST00000462787 KIR3DP1A8MWS1 328 aa13.1□□□□□ -0.31
SMC4-204ENST00000462787 A8MWV9 139 aa13.1□□□□□ -0.31
SMC4-204ENST00000462787 OR10W1Q8NGF6 305 aa13.1□□□□□ -0.31
SMC4-204ENST00000462787 C18orf32Q8TCD1 76 aa13.1□□□□□ -0.31
SMC4-204ENST00000462787 MPDZO75970 2070 aa13.09□□□□□ -0.31
SMC4-204ENST00000462787 TRAV5A0A0B4J249 113 aa13.09□□□□□ -0.31
SMC4-204ENST00000462787 CDKN1BP46527 198 aa13.09□□□□□ -0.31
SMC4-204ENST00000462787 FNDC10F2Z333 226 aa13.09□□□□□ -0.31
SMC4-204ENST00000462787 CECR9P0C854 216 aa13.09□□□□□ -0.31
SMC4-204ENST00000462787 IGKV3-7A0A075B6H7 116 aa13.09□□□□□ -0.31
SMC4-204ENST00000462787 LINC00312Q9Y6C7 94 aa13.08□□□□□ -0.31
SMC4-204ENST00000462787 IGHV2-26A0A0B4J1V2 119 aa13.08□□□□□ -0.32
SMC4-204ENST00000462787 PRR19A6NJB7 356 aa13.08□□□□□ -0.32
SMC4-204ENST00000462787 C1orf210Q8IVY1 113 aa13.08□□□□□ -0.32
SMC4-204ENST00000462787 PYGO2Q9BRQ0 406 aa13.08□□□□□ -0.32
SMC4-204ENST00000462787 TDRD6O60522 2096 aaKnown RBP13.08□□□□□ -0.32
SMC4-204ENST00000462787 WIPF3A6NGB9 483 aa13.08□□□□□ -0.32
SMC4-204ENST00000462787 FABP5P3A8MUU1 101 aa13.08□□□□□ -0.32
SMC4-204ENST00000462787 H3BRM9 83 aa13.08□□□□□ -0.32
SMC4-204ENST00000462787 C5orf24Q7Z6I8 188 aa13.08□□□□□ -0.32
SMC4-204ENST00000462787 GFRA3O60609 400 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 CELA3AP09093 270 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 PRR7Q8TB68 274 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 PTPRDP23468 1912 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 FAM106CPP0CH98 169 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 SRSF1Q07955 248 aaKnown RBP eCLIP13.07□□□□□ -0.329e-8■■□□□ 13.7
SMC4-204ENST00000462787 ZFAND6Q6FIF0 208 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 DMRTC2Q8IXT2 367 aaPredicted RBP13.07□□□□□ -0.32
SMC4-204ENST00000462787 STPG4Q8N801 248 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
SMC4-204ENST00000462787 IGKV3D-15A0A087WSY6 115 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 PVRIGQ6DKI7 326 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 LIME1Q9H400 295 aa13.07□□□□□ -0.32
SMC4-204ENST00000462787 PATE3B3GLJ2 98 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 PRSS8Q16651 343 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 C8orf46Q8TAG6 207 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 RP1L1Q8IWN7 2480 aaPredicted RBP13.06□□□□□ -0.32
SMC4-204ENST00000462787 PDLIM4P50479 330 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 LOXL3P58215 753 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 ASCL2Q99929 193 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 RLFQ13129 1914 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 FAM231BA6NCW3 169 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 SMAD7O15105 426 aaKnown RBP13.06□□□□□ -0.32
SMC4-204ENST00000462787 LHX2P50458 406 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 Q6P435 159 aa13.06□□□□□ -0.32
SMC4-204ENST00000462787 WDR81Q562E7 1941 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 NPPCP23582 126 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 FAM216BQ8N7L0 139 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 PPIAL4CA0A0B4J2A2 164 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 IGHV2OR16-5A0A0B4J2B6 119 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 TCRAP04437 139 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 CELA3BP08861 270 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 PPIAL4GP0DN37 164 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 GAGE2BQ13066 116 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 GAGE2EQ4V326 116 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 GFRA4Q9GZZ7 299 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 GAGE2DQ9UEU5 116 aa13.05□□□□□ -0.32
SMC4-204ENST00000462787 IGKV1-6A0A0C4DH72 117 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 C9orf118A6NHY6 69 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 KLK10O43240 276 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 TRIP6Q15654 476 aaKnown RBP13.04□□□□□ -0.32
SMC4-204ENST00000462787 ORMDL2Q53FV1 153 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 FAM90A27PA6NNH2 459 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 CRXO43186 299 aaPredicted RBP13.04□□□□□ -0.32
SMC4-204ENST00000462787 ASIPP42127 132 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 IGHV1-2P23083 117 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
SMC4-204ENST00000462787 ADAMTSL5Q6ZMM2 481 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 TET1Q8NFU7 2136 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 VKORC1Q9BQB6 163 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 FBXL15Q9H469 300 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 RALGAPA1Q6GYQ0 2036 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 SH2D7A6NKC9 451 aaPredicted RBP13.04□□□□□ -0.32
SMC4-204ENST00000462787 D6R8Y8 96 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 PSPNO60542 156 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 IGLL1P15814 213 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 UNQ6494/PRO21346Q6UXR6 183 aa13.04□□□□□ -0.32
SMC4-204ENST00000462787 E9PLN8 166 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 F2Z2F3 143 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 RPL15P61313 204 aaKnown RBP13.03□□□□□ -0.32
SMC4-204ENST00000462787 MAFAQ8NHW3 353 aaPredicted RBP13.03□□□□□ -0.32
SMC4-204ENST00000462787 PSG3Q16557 428 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 TGFAP01135 160 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 EBLN2Q6P2I7 272 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 C21orf62Q9NYP8 219 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 V9GYV3 84 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 LINC00473A8K010 186 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 M0R381 172 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 IGKV1D-33P01593 117 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 IGKV1-33P01594 117 aa13.03□□□□□ -0.32
SMC4-204ENST00000462787 CHTOPQ9Y3Y2 248 aaKnown RBP13.03□□□□□ -0.32
SMC4-204ENST00000462787 K7EP13 123 aa13.02□□□□□ -0.32
SMC4-204ENST00000462787 KLRB1Q12918 225 aa13.02□□□□□ -0.32
SMC4-204ENST00000462787 ZNF815PA8K554 130 aa13.02□□□□□ -0.32
SMC4-204ENST00000462787 MLNRO43193 412 aa13.02□□□□□ -0.32
SMC4-204ENST00000462787 KIR3DL3Q8N743 410 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms