RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 NDUFB8O95169 186 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 LEPROTL1O95214 131 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 LTAP01374 205 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 TNFRSF1AP19438 455 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 ORM2P19652 201 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 MC5RP33032 325 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 MYCNOSP40205 109 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 GPR6P46095 362 aaPredicted RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 RPL27AP46776 148 aaKnown RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 LGALS7P47929 136 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 REG1BP48304 166 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 RPS20P60866 119 aaKnown RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 SSBP2P81877 361 aaPredicted RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 WT1-ASQ06250 92 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 VAMP3Q15836 100 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 MLANAQ16655 118 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 DEFB109BQ30KR1 87 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 FBLN7Q53RD9 439 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 SPRNQ5BIV9 151 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 LRRC10Q5BKY1 277 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 MORN5Q5VZ52 161 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 SLC25A34Q6PIV7 304 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 DUX4L9Q6RFH8 374 aaPredicted RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 UNQ5815/PRO19632Q6UWF5 114 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 PET117Q6UWS5 81 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM108Q6UXF1 575 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 C12orf54Q6X4T0 127 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 RBPMS2Q6ZRY4 209 aaKnown RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 TCF24Q7RTU0 167 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 LINC00305Q7Z4B0 112 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 Q86TA4 180 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 ZCCHC24Q8N2G6 241 aaKnown RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 LINC00311Q8N616 119 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 NUP37Q8NFH4 326 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 OR4C5Q8NGB2 326 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 OR5AN1Q8NGI8 311 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 BLNKQ8WV28 456 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 H1FXQ92522 213 aaKnown RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM186Q96B77 213 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 PGLYRP4Q96LB8 373 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 TRGV9Q99603 122 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 PMCHL2Q9BQD1 86 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 SSBP4Q9BWG4 385 aaPredicted RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 MAP1LC3CQ9BXW4 147 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 MS4A6AQ9H2W1 248 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 Q9H3A6 140 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 GSX1Q9H4S2 264 aaPredicted RBP2.84□□□□□ -1.95
COL8A1-204ENST00000462604 C7orf69Q9H7B7 122 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 OTORQ9NRC9 128 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 CLEC5AQ9NY25 188 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 ZNRD1Q9P1U0 126 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 HIGD1AQ9Y241 93 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF835Q9Y2P0 537 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 KLF12Q9Y4X4 402 aa2.84□□□□□ -1.95
COL8A1-204ENST00000462604 ARID1BQ8NFD5 2236 aaPredicted RBP2.84□□□□□ -1.96
COL8A1-204ENST00000462604 TDRD6O60522 2096 aaKnown RBP2.83□□□□□ -1.96
COL8A1-204ENST00000462604 TRAV30A0A087WSZ9 112 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 LOC102724200A0A096LPH7 203 aaPredicted RBP2.83□□□□□ -1.96
COL8A1-204ENST00000462604 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.83□□□□□ -1.96
COL8A1-204ENST00000462604 IGHV2-70DA0A0C4DH43 119 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 TRBV6-1A0A0K0K1D8 114 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 C19orf71A6NCJ1 209 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 C2orf70A6NJV1 201 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 SYS1-DBNDD2H3BUS1 97 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 K7EQM0 130 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 HAX1O00165 279 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 CCL25O15444 150 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 CRXO43186 299 aaPredicted RBP2.83□□□□□ -1.96
COL8A1-204ENST00000462604 ENSAO43768 121 aaKnown RBP2.83□□□□□ -1.96
COL8A1-204ENST00000462604 SLC25A17O43808 307 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 FSTL3O95633 263 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 MOSP00540 346 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 PLAUP00749 431 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 HLA-DRB1P01911 266 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 TCRAP04437 139 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 NBEAP1P0C6P0 100 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 GP9P14770 177 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 IGLL1P15814 213 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 CCL3L1P16619 93 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 COL8A2P25067 703 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 CD40P25942 277 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 HTR1DP28221 377 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 PCP4P48539 62 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 FOXA3P55318 350 aaPredicted RBP2.83□□□□□ -1.96
COL8A1-204ENST00000462604 PLP1P60201 277 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 LYZP61626 148 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 HIST1H1AQ02539 215 aaPredicted RBP2.83□□□□□ -1.96
COL8A1-204ENST00000462604 RIGQ13278 110 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 COTL1Q14019 142 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 ADIPOQQ15848 244 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 MAJINQ3KP22 176 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 C10orf55Q5SWW7 151 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 FAM120AOSQ5T036 256 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 TMEM200BQ69YZ2 307 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 Q6AWC8 147 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 ZNF474Q6S9Z5 364 aaPredicted RBP2.83□□□□□ -1.96
COL8A1-204ENST00000462604 PATE2Q6UY27 113 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 SEM1Q6ZVN7 128 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 FA2HQ7L5A8 372 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 SSX8Q7RTT4 187 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms