RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 IGLC1P0CG04 106 aa13.93□□□□□ -0.18
VARS-220ENST00000461874 SLC25A4P12235 298 aa13.93□□□□□ -0.18
VARS-220ENST00000461874 AKR1C4P17516 323 aa13.93□□□□□ -0.18
VARS-220ENST00000461874 ATF4P18848 351 aaPredicted RBP13.93□□□□□ -0.18
VARS-220ENST00000461874 SUPT4H1P63272 117 aaKnown RBP13.93□□□□□ -0.18
VARS-220ENST00000461874 OR1S2Q8NGQ3 325 aa13.93□□□□□ -0.18
VARS-220ENST00000461874 HYDINQ4G0P3 5121 aa13.92□□□□□ -0.18
VARS-220ENST00000461874 A0A0B4J2A0 478 aa13.92□□□□□ -0.18
VARS-220ENST00000461874 CXorf65A6NEN9 183 aa13.92□□□□□ -0.18
VARS-220ENST00000461874 NXPH3O95157 252 aa13.92□□□□□ -0.18
VARS-220ENST00000461874 RND2P52198 227 aa13.92□□□□□ -0.18
VARS-220ENST00000461874 DEFB131AP59861 70 aa13.92□□□□□ -0.18
VARS-220ENST00000461874 PMS2P11Q13670 270 aa13.92□□□□□ -0.18
VARS-220ENST00000461874 FAM24BQ8N5W8 94 aa13.92□□□□□ -0.18
VARS-220ENST00000461874 SHPKQ9UHJ6 478 aa13.92□□□□□ -0.18
VARS-220ENST00000461874 NPY1RP25929 384 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 OR10J1P30954 320 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 P2RY1P47900 373 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 CCR6P51684 374 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 YPEL3P61236 119 aaPredicted RBP13.91□□□□□ -0.18
VARS-220ENST00000461874 KLF9Q13886 244 aaPredicted RBP13.91□□□□□ -0.18
VARS-220ENST00000461874 ETFRF1Q6IPR1 90 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 LYZL2Q7Z4W2 148 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 NOXA1Q86UR1 476 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 TMEM217Q8N7C4 229 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 GATAD1Q8WUU5 269 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 NARS2Q96I59 477 aaKnown RBP13.91□□□□□ -0.18
VARS-220ENST00000461874 HSPB7Q9UBY9 170 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 RABAC1Q9UI14 185 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 U3KQE9 123 aa13.91□□□□□ -0.18
VARS-220ENST00000461874 FAUP35544 74 aaKnown RBP13.9□□□□□ -0.18
VARS-220ENST00000461874 SMCO1Q147U7 214 aa13.9□□□□□ -0.18
VARS-220ENST00000461874 RBMS2Q15434 407 aaKnown RBP13.9□□□□□ -0.18
VARS-220ENST00000461874 LEMD1Q68G75 181 aa13.9□□□□□ -0.18
VARS-220ENST00000461874 LGI3Q8N145 548 aa13.9□□□□□ -0.18
VARS-220ENST00000461874 Q8WTZ3 238 aa13.9□□□□□ -0.18
VARS-220ENST00000461874 TRIM63Q969Q1 353 aa13.9□□□□□ -0.18
VARS-220ENST00000461874 U3KQ87 197 aa13.9□□□□□ -0.18
VARS-220ENST00000461874 K7EQG2 157 aa13.89□□□□□ -0.19
VARS-220ENST00000461874 ANXA3P12429 323 aa13.89□□□□□ -0.19
VARS-220ENST00000461874 SRPXP78539 464 aa13.89□□□□□ -0.19
VARS-220ENST00000461874 PYDC2Q56P42 97 aa13.89□□□□□ -0.19
VARS-220ENST00000461874 STXBP6Q8NFX7 210 aa13.89□□□□□ -0.19
VARS-220ENST00000461874 NPIPB3Q92617 1050 aa13.89□□□□□ -0.19
VARS-220ENST00000461874 GRAMD2BQ96HH9 432 aa13.89□□□□□ -0.19
VARS-220ENST00000461874 RARRES2Q99969 163 aa13.89□□□□□ -0.19
VARS-220ENST00000461874 V9GYH0 126 aa13.89□□□□□ -0.19
VARS-220ENST00000461874 NUPR2A6NF83 97 aa13.88□□□□□ -0.19
VARS-220ENST00000461874 IFNA10P01566 189 aa13.88□□□□□ -0.19
VARS-220ENST00000461874 AP3S2P59780 193 aa13.88□□□□□ -0.19
VARS-220ENST00000461874 CEMP1Q6PRD7 247 aaPredicted RBP13.88□□□□□ -0.19
VARS-220ENST00000461874 DTD1Q8TEA8 209 aa13.88□□□□□ -0.19
VARS-220ENST00000461874 RBKSQ9H477 322 aa13.88□□□□□ -0.19
VARS-220ENST00000461874 CA1P00915 261 aaPredicted RBP13.87□□□□□ -0.19
VARS-220ENST00000461874 HNRNPCP07910 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
VARS-220ENST00000461874 TOMM5Q8N4H5 51 aa13.87□□□□□ -0.19
VARS-220ENST00000461874 OR11H2Q8NH07 326 aa13.87□□□□□ -0.19
VARS-220ENST00000461874 DCANP1Q8TF63 244 aa13.87□□□□□ -0.19
VARS-220ENST00000461874 ACY3Q96HD9 319 aa13.87□□□□□ -0.19
VARS-220ENST00000461874 EPPK1P58107 5090 aaKnown RBP13.86□□□□□ -0.19
VARS-220ENST00000461874 PIGBOS1A0A0B4J2F0 54 aa13.86□□□□□ -0.19
VARS-220ENST00000461874 HELTA6NFD8 242 aa13.86□□□□□ -0.19
VARS-220ENST00000461874 RD3LP0DJH9 198 aa13.86□□□□□ -0.19
VARS-220ENST00000461874 EIF2B2P49770 351 aaKnown RBP13.86□□□□□ -0.19
VARS-220ENST00000461874 ATP5IP56385 69 aaPredicted RBP13.86□□□□□ -0.19
VARS-220ENST00000461874 USF2Q15853 346 aaPredicted RBP13.86□□□□□ -0.19
VARS-220ENST00000461874 ZNF79Q15937 498 aa13.86□□□□□ -0.19
VARS-220ENST00000461874 TMEM128Q5BJH2 165 aa13.86□□□□□ -0.19
VARS-220ENST00000461874 C16orf54Q6UWD8 224 aa13.86□□□□□ -0.19
VARS-220ENST00000461874 TMED4Q7Z7H5 227 aa13.86□□□□□ -0.19
VARS-220ENST00000461874 STHQ8IWL8 128 aa13.86□□□□□ -0.19
VARS-220ENST00000461874 GLMPQ8WWB7 406 aa13.86□□□□□ -0.19
VARS-220ENST00000461874 DUXBA0A1W2PPF3 345 aa13.85□□□□□ -0.19
VARS-220ENST00000461874 CCDC160A6NGH7 325 aa13.85□□□□□ -0.19
VARS-220ENST00000461874 TOMM40O96008 361 aa13.85□□□□□ -0.19
VARS-220ENST00000461874 IL4P05112 153 aa13.85□□□□□ -0.19
VARS-220ENST00000461874 ZNF688P0C7X2 276 aa13.85□□□□□ -0.19
VARS-220ENST00000461874 S100A5P33763 92 aa13.85□□□□□ -0.19
VARS-220ENST00000461874 OR1S1Q8NH92 325 aa13.85□□□□□ -0.19
VARS-220ENST00000461874 DEDD2Q8WXF8 326 aa13.85□□□□□ -0.19
VARS-220ENST00000461874 LINC00476Q8WZB0 136 aa13.85□□□□□ -0.19
VARS-220ENST00000461874 PITX3O75364 302 aa13.84□□□□□ -0.19
VARS-220ENST00000461874 IFNA4P05014 189 aa13.84□□□□□ -0.19
VARS-220ENST00000461874 AP2S1P53680 142 aaPredicted RBP13.84□□□□□ -0.19
VARS-220ENST00000461874 DHRS2Q13268 280 aa13.84□□□□□ -0.19
VARS-220ENST00000461874 TRPT1Q86TN4 253 aaKnown RBP13.84□□□□□ -0.19
VARS-220ENST00000461874 CCDC190Q86UF4 302 aa13.84□□□□□ -0.19
VARS-220ENST00000461874 LRTM2Q8N967 370 aa13.84□□□□□ -0.19
VARS-220ENST00000461874 SLC25A21Q9BQT8 299 aaPredicted RBP13.84□□□□□ -0.19
VARS-220ENST00000461874 C11orf68Q9H3H3 251 aaKnown RBP13.84□□□□□ -0.19
VARS-220ENST00000461874 KLK5Q9Y337 293 aaPredicted RBP13.84□□□□□ -0.19
VARS-220ENST00000461874 KNCNA6PVL3 124 aa13.83□□□□□ -0.2
VARS-220ENST00000461874 GIG44P09565 113 aaPredicted RBP13.83□□□□□ -0.2
VARS-220ENST00000461874 PSG1P11464 419 aa13.83□□□□□ -0.2
VARS-220ENST00000461874 GPX4P36969 197 aaPredicted RBP13.83□□□□□ -0.2
VARS-220ENST00000461874 RBM38Q9H0Z9 239 aaKnown RBP13.83□□□□□ -0.2
VARS-220ENST00000461874 BUB3O43684 328 aa13.82□□□□□ -0.2
VARS-220ENST00000461874 SLC25A6P12236 298 aa13.82□□□□□ -0.2
VARS-220ENST00000461874 VAMP1P23763 118 aa13.82□□□□□ -0.2
VARS-220ENST00000461874 GAMTQ14353 236 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms