RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 OR1S2Q8NGQ3 325 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
VARS-219ENST00000461328 ZNF414Q96IQ9 312 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 RNF2Q99496 336 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 ZFAND3Q9H8U3 227 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 UBQLN2Q9UHD9 624 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 NBEAL2Q6ZNJ1 2754 aa11.51□□□□□ -0.57
VARS-219ENST00000461328 IGHV3-66A0A0C4DH42 116 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 LYRM1O43325 122 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 OR4E1P0C645 316 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 OR10J1P30954 320 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 TFPI2P48307 235 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 DHRS2Q13268 280 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 CNPY1Q3B7I2 92 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 LYG2Q86SG7 212 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 TMEM170AQ8WVE7 144 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 METTL26Q96S19 204 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 TMEM231Q9H6L2 316 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 RETNQ9HD89 108 aa11.5□□□□□ -0.57
VARS-219ENST00000461328 FAM90A26D6RGX4 464 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 PITX3O75364 302 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 IFNA21P01568 189 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 NPPCP23582 126 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 RAB11AP62491 216 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 RPL11P62913 178 aaKnown RBP11.49□□□□□ -0.57
VARS-219ENST00000461328 CASC10Q5T4H9 136 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 TCF24Q7RTU0 167 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 ST8SIA2Q92186 375 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 NPIPB3Q92617 1050 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 CIB3Q96Q77 187 aaPredicted RBP11.49□□□□□ -0.57
VARS-219ENST00000461328 CCDC32Q9BV29 185 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 MAGT1Q9H0U3 335 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 C20orf85Q9H1P6 137 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 EDA2RQ9HAV5 297 aa11.49□□□□□ -0.57
VARS-219ENST00000461328 ADAP1O75689 374 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 IGKV1-17P01599 117 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 IGLC1P0CG04 106 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 ATP5IP56385 69 aaPredicted RBP11.48□□□□□ -0.57
VARS-219ENST00000461328 PAFAH1B2P68402 229 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 RPP30P78346 268 aaKnown RBP11.48□□□□□ -0.57
VARS-219ENST00000461328 GBGT1Q8N5D6 347 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 Q8WTZ3 238 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 S100ZQ8WXG8 99 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 SLC35E1Q96K37 410 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 FAM110AQ9BQ89 295 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 GGTLC1Q9BX51 225 aa11.48□□□□□ -0.57
VARS-219ENST00000461328 A0A1W2PS18 150 aa11.47□□□□□ -0.57
VARS-219ENST00000461328 WRBO00258 174 aa11.47□□□□□ -0.57
VARS-219ENST00000461328 PLA2G10O15496 165 aa11.47□□□□□ -0.57
VARS-219ENST00000461328 SYNGR2O43760 224 aa11.47□□□□□ -0.57
VARS-219ENST00000461328 APOHP02749 345 aaPredicted RBP11.47□□□□□ -0.57
VARS-219ENST00000461328 CD5P06127 495 aa11.47□□□□□ -0.57
VARS-219ENST00000461328 TRAV6A0A075B6T7 132 aa11.46□□□□□ -0.57
VARS-219ENST00000461328 LOC102724200A0A096LPH7 203 aaPredicted RBP11.46□□□□□ -0.57
VARS-219ENST00000461328 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.57
VARS-219ENST00000461328 IL4P05112 153 aa11.46□□□□□ -0.57
VARS-219ENST00000461328 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.57
VARS-219ENST00000461328 ODF3L2Q3SX64 289 aa11.46□□□□□ -0.57
VARS-219ENST00000461328 ZFAND6Q6FIF0 208 aa11.46□□□□□ -0.57
VARS-219ENST00000461328 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
VARS-219ENST00000461328 WFDC3Q8IUB2 231 aa11.46□□□□□ -0.57
VARS-219ENST00000461328 GRAMD2BQ96HH9 432 aa11.46□□□□□ -0.57
VARS-219ENST00000461328 VSIRQ9H7M9 311 aa11.46□□□□□ -0.57
VARS-219ENST00000461328 ZFP92A6NM28 416 aa11.45□□□□□ -0.58
VARS-219ENST00000461328 DFFBO76075 338 aa11.45□□□□□ -0.58
VARS-219ENST00000461328 SCGB1D2O95969 90 aa11.45□□□□□ -0.58
VARS-219ENST00000461328 RD3LP0DJH9 198 aa11.45□□□□□ -0.58
VARS-219ENST00000461328 P2RY1P47900 373 aa11.45□□□□□ -0.58
VARS-219ENST00000461328 SPANXN5Q5MJ07 72 aa11.45□□□□□ -0.58
VARS-219ENST00000461328 WDR12Q9GZL7 423 aaKnown RBP11.45□□□□□ -0.58
VARS-219ENST00000461328 NUDT15Q9NV35 164 aa11.45□□□□□ -0.58
VARS-219ENST00000461328 PTTG2Q9NZH5 202 aa11.45□□□□□ -0.58
VARS-219ENST00000461328 RABAC1Q9UI14 185 aa11.45□□□□□ -0.58
VARS-219ENST00000461328 KMT2CQ8NEZ4 4911 aaKnown RBP11.45□□□□□ -0.58
VARS-219ENST00000461328 A6NHS1 94 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 MPTX1A8MV57 137 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 H3BP45 60 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 SSSCA1O60232 199 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 TOMM40O96008 361 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 TCRBP04435 133 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 FABP1P07148 127 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 HNRNPCP07910 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
VARS-219ENST00000461328 GPX4P36969 197 aaPredicted RBP11.44□□□□□ -0.58
VARS-219ENST00000461328 NKX2-1P43699 371 aaPredicted RBP11.44□□□□□ -0.58
VARS-219ENST00000461328 MZT2BQ6NZ67 158 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 STXBP6Q8NFX7 210 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 MS4A6AQ9H2W1 248 aa11.44□□□□□ -0.58
VARS-219ENST00000461328 FAM240BA0A1B0GVZ2 78 aa11.43□□□□□ -0.58
VARS-219ENST00000461328 CRYBB3P26998 211 aa11.43□□□□□ -0.58
VARS-219ENST00000461328 EIF2B2P49770 351 aaKnown RBP11.43□□□□□ -0.58
VARS-219ENST00000461328 APOC4P55056 127 aa11.43□□□□□ -0.58
VARS-219ENST00000461328 CMC4P56277 68 aaPredicted RBP11.43□□□□□ -0.58
VARS-219ENST00000461328 POLR2GP62487 172 aaKnown RBP eCLIP11.43□□□□□ -0.58
VARS-219ENST00000461328 GAMTQ14353 236 aa11.43□□□□□ -0.58
VARS-219ENST00000461328 IAH1Q2TAA2 248 aaPredicted RBP11.43□□□□□ -0.58
VARS-219ENST00000461328 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
VARS-219ENST00000461328 APRG1Q8IVJ8 170 aa11.43□□□□□ -0.58
VARS-219ENST00000461328 LILRB2Q8N423 598 aa11.43□□□□□ -0.58
VARS-219ENST00000461328 MITD1Q8WV92 249 aa11.43□□□□□ -0.58
VARS-219ENST00000461328 PBDC1Q9BVG4 233 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms