RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 ID3Q02535 119 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 ZNF846Q147U1 533 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 TIGITQ495A1 244 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 LINC00322Q6ZN03 302 aaPredicted RBP12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 DEFB125Q8N687 156 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 OR1S2Q8NGQ3 325 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 MITD1Q8WV92 249 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 NPIPB3Q92617 1050 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 CIB3Q96Q77 187 aaPredicted RBP12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 RNF2Q99496 336 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 WDR12Q9GZL7 423 aaKnown RBP12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 MAGT1Q9H0U3 335 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 TBC1D24Q9ULP9 559 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 TRAV6A0A075B6T7 132 aa12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 IGHV3-49A0A0A0MS15 119 aa12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 IAPPP10997 89 aa12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 OR10J1P30954 320 aa12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 GPX4P36969 197 aaPredicted RBP12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 YPEL3P61236 119 aaPredicted RBP12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 ASAH1Q13510 395 aa12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 TM2D3Q9BRN9 247 aa12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 WFDC10AQ9H1F0 79 aa12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 VSIRQ9H7M9 311 aa12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 NUDT15Q9NV35 164 aa12.3□□□□□ -0.44
SMARCD3-204ENST00000460431 IGHV3OR16-13A0A075B7E8 117 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 IGHV3-74A0A0B4J1X5 117 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 FAM240BA0A1B0GVZ2 78 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 NPPCP23582 126 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 RAB11AP62491 216 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 HAGHQ16775 308 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 FAM90A2PQ658T7 463 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 MZT2BQ6NZ67 158 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 OR4D5Q8NGN0 318 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 ACY3Q96HD9 319 aa12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
SMARCD3-204ENST00000460431 RBMY1BA6NDE4 496 aaKnown RBP12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 RBMY1EA6NEQ0 496 aaKnown RBP12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 WRBO00258 174 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 UPK1BO75841 260 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 APOHP02749 345 aaPredicted RBP12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 CD5P06127 495 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 RBMY1DP0C7P1 496 aaKnown RBP12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 CRYBB3P26998 211 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 BMI1P35226 326 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 RPP30P78346 268 aaKnown RBP12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 GAMTQ14353 236 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 LILRB2Q8N423 598 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 Q8WTZ3 238 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 ST8SIA2Q92186 375 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 SRD5A3Q9H8P0 318 aa12.28□□□□□ -0.44
SMARCD3-204ENST00000460431 H2AFB2P0C5Z0 115 aa12.27□□□□□ -0.45
SMARCD3-204ENST00000460431 NKX2-1P43699 371 aaPredicted RBP12.27□□□□□ -0.45
SMARCD3-204ENST00000460431 RCHY1Q96PM5 261 aa12.27□□□□□ -0.45
SMARCD3-204ENST00000460431 METTL26Q96S19 204 aa12.27□□□□□ -0.45
SMARCD3-204ENST00000460431 STAB2Q8WWQ8 2551 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 A0A1W2PS18 150 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 OR4C46A6NHA9 309 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 POLR2GP62487 172 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 IFITM3Q01628 133 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 IAH1Q2TAA2 248 aaPredicted RBP12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 TCF24Q7RTU0 167 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 ZNF431Q8TF32 576 aaPredicted RBP12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 SLC35E1Q96K37 410 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 FAM110AQ9BQ89 295 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 TMEM231Q9H6L2 316 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 U3KQE9 123 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 RYR3Q15413 4870 aa12.26□□□□□ -0.45
SMARCD3-204ENST00000460431 IGHV3-66A0A0C4DH42 116 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 PRSS46E5RG02 174 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 DFFBO76075 338 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 TOMM40O96008 361 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 RD3LP0DJH9 198 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 ODF3L2Q3SX64 289 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 SPANXN5Q5MJ07 72 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 ZBTB8BQ8NAP8 495 aaPredicted RBP12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 SMIM8Q96KF7 97 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 CITED4Q96RK1 184 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 SEC22CQ9BRL7 303 aa12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 PAIP2BQ9ULR5 123 aaKnown RBP12.25□□□□□ -0.45
SMARCD3-204ENST00000460431 IGKV1D-37A0A075B6S9 117 aa12.24□□□□□ -0.45
SMARCD3-204ENST00000460431 PSG1P11464 419 aa12.24□□□□□ -0.45
SMARCD3-204ENST00000460431 PAFAH1B2P68402 229 aa12.24□□□□□ -0.45
SMARCD3-204ENST00000460431 SPATA25Q9BR10 227 aa12.24□□□□□ -0.45
SMARCD3-204ENST00000460431 UBQLN2Q9UHD9 624 aa12.24□□□□□ -0.45
SMARCD3-204ENST00000460431 STRAPQ9Y3F4 350 aaKnown RBP12.24□□□□□ -0.45
SMARCD3-204ENST00000460431 IGKV3-7A0A075B6H7 116 aa12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 ZFP92A6NM28 416 aa12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 C3orf84H3BNL1 204 aa12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 H3BP45 60 aa12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 SSSCA1O60232 199 aa12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 IL4P05112 153 aa12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 PAX9P55771 341 aa12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 CMC4P56277 68 aaPredicted RBP12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 USF2Q15853 346 aaPredicted RBP12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 GBGT1Q8N5D6 347 aa12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 C12orf45Q8N5I9 185 aaPredicted RBP12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 NARS2Q96I59 477 aaKnown RBP12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 PSENENQ9NZ42 101 aa12.23□□□□□ -0.45
SMARCD3-204ENST00000460431 GSKIPQ9P0R6 139 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms