RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 TRAPPC5Q8IUR0 188 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 TMEM251Q8N6I4 163 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 ZNF565Q8N9K5 539 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 LFNGQ8NES3 379 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 ATP6V1C2Q8NEY4 427 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 OR7G1Q8NGA0 311 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 OR4E2Q8NGC2 313 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 OR52E4Q8NGH9 312 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 OR4K13Q8NH42 304 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 SMIM12Q96EX1 92 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 TBX5Q99593 518 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 GPR22Q99680 433 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 DHRS9Q9BPW9 319 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 SELENOSQ9BQE4 189 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 VCX3BQ9H321 246 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 TMEM106BQ9NUM4 274 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 PRELID1Q9Y255 219 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 FIS1Q9Y3D6 152 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 GMEB1Q9Y692 573 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 HSPG2P98160 4391 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 KMT2AQ03164 3969 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 NCKAP5O14513 1909 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 HUWE1Q7Z6Z7 4374 aaKnown RBP1.3□□□□□ -2.2
RFC4-211ENST00000460408 ARFGEF3Q5TH69 2177 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 A0A0J9YX75 114 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 A0A0J9YY10 115 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 PVALEFA0A1B0GWK0 134 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 KNCNA6PVL3 124 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 H3BQV1 296 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 GOLGA8MH3BSY2 632 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 CALUO43852 315 aaPredicted RBP1.29□□□□□ -2.2
RFC4-211ENST00000460408 STX10O60499 249 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 NIPSNAP2O75323 286 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 LY6HO94772 140 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 ORM1P02763 201 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 CPMP14384 443 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 PSMB6P28072 239 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 PPP1CCP36873 323 aaKnown RBP1.29□□□□□ -2.2
RFC4-211ENST00000460408 GTF2A1P52655 376 aaPredicted RBP1.29□□□□□ -2.2
RFC4-211ENST00000460408 RWDD2BP57060 319 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 TSPEAR-AS2P59090 65 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 ACTBP60709 375 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 AP1S1P61966 158 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 GNA13Q14344 377 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 TMEM176BQ3YBM2 270 aaPredicted RBP1.29□□□□□ -2.2
RFC4-211ENST00000460408 ACSBG2Q5FVE4 666 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 PDPK2PQ6A1A2 396 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 RIBC1Q8N443 379 aaPredicted RBP1.29□□□□□ -2.2
RFC4-211ENST00000460408 RPP25LQ8N5L8 163 aaKnown RBP1.29□□□□□ -2.2
RFC4-211ENST00000460408 TMEM86BQ8N661 226 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 OR11H1Q8NG94 326 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 POP5Q969H6 163 aaKnown RBP1.29□□□□□ -2.2
RFC4-211ENST00000460408 MUCL1Q96DR8 90 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 ACY3Q96HD9 319 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 ABHD14BQ96IU4 210 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 ARL5BQ96KC2 179 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 CDCA4Q9BXL8 241 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 NSRP1Q9H0G5 558 aaKnown RBP1.29□□□□□ -2.2
RFC4-211ENST00000460408 MED28Q9H204 178 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 PSMD13Q9UNM6 376 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 COQ4Q9Y3A0 265 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 SAMHD1Q9Y3Z3 626 aaKnown RBP1.29□□□□□ -2.2
RFC4-211ENST00000460408 MINOS1-NBL1R4GNA1 71 aa1.29□□□□□ -2.2
RFC4-211ENST00000460408 SCN3AQ9NY46 2000 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 RNF213Q63HN8 5207 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 DNAH11Q96DT5 4516 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 IGHV3-73A0A0B4J1V6 119 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 MUC21A0A0G2JKD1 596 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 MUC21A0A140T8X8 626 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 SIGLEC16A6NMB1 481 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 FTCDNL1E5RQL4 147 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 LY6LH3BQJ8 138 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 ADAP1O75689 374 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 ARL6IP5O75915 188 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 OR5F1O95221 314 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 OR13C7P0DN81 318 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 UGT2B7P16662 529 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 GRPRP30550 384 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 HSPA9P38646 679 aaKnown RBP1.28□□□□□ -2.2
RFC4-211ENST00000460408 LPAR6P43657 344 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 DAPP51397 102 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 CTBP2P56545 445 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 OR4D2P58180 307 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 MAXP61244 160 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 DAD1P61803 113 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 BASP1P80723 227 aaKnown RBP1.28□□□□□ -2.2
RFC4-211ENST00000460408 TBC1D28Q2M2D7 210 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 NDUFA11Q86Y39 141 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 UMODL1-AS1Q8N2C9 162 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 CDC26Q8NHZ8 85 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 JOSD2Q8TAC2 188 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 PPCDCQ96CD2 204 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 TRNT1Q96Q11 434 aaKnown RBP1.28□□□□□ -2.2
RFC4-211ENST00000460408 RBP7Q96R05 134 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 ZNF426Q9BUY5 554 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 OR51B6Q9H340 312 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 TP53TG1Q9Y2A0 90 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 FAT2Q9NYQ8 4349 aa1.28□□□□□ -2.2
RFC4-211ENST00000460408 KIAA1549Q9HCM3 1950 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 A0A0G2JMM0 328 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms