RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 GAMTQ14353 236 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 NSUN5P1Q3KNT7 163 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 LCNL1Q6ZST4 164 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 Q8WTZ3 238 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 NPIPB3Q92617 1050 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 PPP1R14BQ96C90 147 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 ATP5SQ99766 215 aa9.56□□□□□ -0.88
HDAC4-206ENST00000460235 FNDC4Q9H6D8 234 aaPredicted RBP9.56□□□□□ -0.88
HDAC4-206ENST00000460235 IGHV3-21A0A0B4J1V1 117 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 KANTRA0A1W2PQU2 76 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 A0A1W2PRX2 142 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 ANKRD34BA5PLL1 514 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 OR2T8A6NH00 312 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 PMS2P5A8MQ11 134 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 PRSS46E5RG02 174 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 C17orf112F2Z3M2 114 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 NHLH2Q02577 135 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 ZNF600Q6ZNG1 722 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 C19orf35Q6ZS72 473 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 SPATA3Q8NHX4 192 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 NARS2Q96I59 477 aaKnown RBP9.55□□□□□ -0.88
HDAC4-206ENST00000460235 OR5B12Q96R08 314 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 TRGV9Q99603 122 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 GINS3Q9BRX5 216 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 PEMTQ9UBM1 199 aa9.55□□□□□ -0.88
HDAC4-206ENST00000460235 NDUFA4O00483 81 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 JTBO76095 146 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 RD3LP0DJH9 198 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 VWC2Q2TAL6 325 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 PXDC1Q5TGL8 231 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 GPHB5Q86YW7 130 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 THAP8Q8NA92 274 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 BPIFCQ8NFQ6 507 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 PARD6GQ9BYG4 376 aaPredicted RBP9.54□□□□□ -0.88
HDAC4-206ENST00000460235 UFC1Q9Y3C8 167 aa9.54□□□□□ -0.88
HDAC4-206ENST00000460235 BMPR1BO00238 502 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 CTSGP08311 255 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 ELLP55199 621 aaPredicted RBP9.53□□□□□ -0.88
HDAC4-206ENST00000460235 CLINT1Q14677 625 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 MLANAQ16655 118 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 Q5BKY6 102 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 Q6ZRG5 221 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 C8orf86Q6ZUL3 223 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 C1QL4Q86Z23 238 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 KCNRGQ8N5I3 272 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 ARPC5LQ9BPX5 153 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 NEURL2Q9BR09 285 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 MCRIP2Q9BUT9 160 aaKnown RBP9.53□□□□□ -0.88
HDAC4-206ENST00000460235 ELOVL1Q9BW60 279 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 GPR61Q9BZJ8 451 aa9.53□□□□□ -0.88
HDAC4-206ENST00000460235 NF1P21359 2839 aa9.52□□□□□ -0.88
HDAC4-206ENST00000460235 UBE2L5PA0A1B0GUS4 154 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 SMLR1H3BR10 107 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 LGALS9O00182 355 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 YIF1AO95070 293 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 TOMM40O96008 361 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 IGHV3-48P01763 117 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 IGLC1P0CG04 106 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 CAMLGP49069 296 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 EIF5AL1Q6IS14 154 aaKnown RBP9.52□□□□□ -0.89
HDAC4-206ENST00000460235 BTNL8Q6UX41 500 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 TREML4Q6UXN2 200 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 OR51G1Q8NGK1 321 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 MARC2Q969Z3 335 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 GNPNAT1Q96EK6 184 aaPredicted RBP9.52□□□□□ -0.89
HDAC4-206ENST00000460235 TMEM231Q9H6L2 316 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 WDR83OSQ9Y284 106 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 S4R3C0 116 aa9.52□□□□□ -0.89
HDAC4-206ENST00000460235 A0A1W2PS18 150 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 RNF222A6NCQ9 220 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 K7EMT4 169 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 OR2C1O95371 312 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 CD5P06127 495 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 FGF7P21781 194 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 HOXD3P31249 432 aaPredicted RBP9.51□□□□□ -0.89
HDAC4-206ENST00000460235 KRTAP10-3P60369 221 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 DEFA5Q01523 94 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 ARL16Q0P5N6 197 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 FHL3Q13643 280 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 CYP2G1PQ6ZSU1 146 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 HAPLN4Q86UW8 402 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 RAX2Q96IS3 184 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 SMIM3Q9BZL3 60 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 ARL6Q9H0F7 186 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 FBXL17Q9UF56 701 aa9.51□□□□□ -0.89
HDAC4-206ENST00000460235 IGHV4OR15-8A0A075B7B6 117 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 A0A087WW49 117 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 ELOA3CA0A087WX78 387 aaPredicted RBP9.5□□□□□ -0.89
HDAC4-206ENST00000460235 PPP5D1E7EU14 171 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 G3V3Q6 166 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 AGPAT2O15120 278 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 IGKV1-17P01599 117 aa9.5□□□□□ -0.89
HDAC4-206ENST00000460235 RPL29P47914 159 aaKnown RBP9.5□□□□□ -0.89
HDAC4-206ENST00000460235 EIF2B2P49770 351 aaKnown RBP9.5□□□□□ -0.89
HDAC4-206ENST00000460235 KLF5Q13887 457 aaPredicted RBP9.5□□□□□ -0.89
HDAC4-206ENST00000460235 TIGITQ495A1 244 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms