RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 IFNA4P05014 189 aa15.56■□□□□ 0.08
VARS-218ENST00000459667 NKX2-1P43699 371 aaPredicted RBP15.56■□□□□ 0.08
VARS-218ENST00000459667 RND2P52198 227 aa15.56■□□□□ 0.08
VARS-218ENST00000459667 RAB11AP62491 216 aa15.56■□□□□ 0.08
VARS-218ENST00000459667 LAMTOR1Q6IAA8 161 aa15.56■□□□□ 0.08
VARS-218ENST00000459667 PRSS54Q6PEW0 395 aa15.56■□□□□ 0.08
VARS-218ENST00000459667 TMEM116Q8NCL8 245 aa15.56■□□□□ 0.08
VARS-218ENST00000459667 SEC22CQ9BRL7 303 aa15.56■□□□□ 0.08
VARS-218ENST00000459667 WFDC10AQ9H1F0 79 aa15.56■□□□□ 0.08
VARS-218ENST00000459667 ZFAND3Q9H8U3 227 aa15.56■□□□□ 0.08
VARS-218ENST00000459667 TRAV30A0A087WSZ9 112 aa15.55■□□□□ 0.08
VARS-218ENST00000459667 IGHV3-49A0A0A0MS15 119 aa15.55■□□□□ 0.08
VARS-218ENST00000459667 TSPAN4O14817 238 aa15.55■□□□□ 0.08
VARS-218ENST00000459667 IAPPP10997 89 aa15.55■□□□□ 0.08
VARS-218ENST00000459667 IAH1Q2TAA2 248 aaPredicted RBP15.55■□□□□ 0.08
VARS-218ENST00000459667 C12orf45Q8N5I9 185 aaPredicted RBP15.55■□□□□ 0.08
VARS-218ENST00000459667 SPAG8Q99932 426 aaPredicted RBP15.55■□□□□ 0.08
VARS-218ENST00000459667 RHPN1-AS1Q9BWJ2 59 aa15.55■□□□□ 0.08
VARS-218ENST00000459667 MAGT1Q9H0U3 335 aa15.55■□□□□ 0.08
VARS-218ENST00000459667 GPN1Q9HCN4 374 aaPredicted RBP15.55■□□□□ 0.08
VARS-218ENST00000459667 MPTX1A8MV57 137 aa15.54■□□□□ 0.08
VARS-218ENST00000459667 OR11H12B2RN74 326 aa15.54■□□□□ 0.08
VARS-218ENST00000459667 CHEK1O14757 476 aa15.54■□□□□ 0.08
VARS-218ENST00000459667 IL5P05113 134 aa15.54■□□□□ 0.08
VARS-218ENST00000459667 TIGITQ495A1 244 aa15.54■□□□□ 0.08
VARS-218ENST00000459667 NRARPQ7Z6K4 114 aa15.54■□□□□ 0.08
VARS-218ENST00000459667 DEFB125Q8N687 156 aa15.54■□□□□ 0.08
VARS-218ENST00000459667 SRD5A3Q9H8P0 318 aa15.54■□□□□ 0.08
VARS-218ENST00000459667 PAIP2BQ9ULR5 123 aaKnown RBP15.54■□□□□ 0.08
VARS-218ENST00000459667 IGHV3OR16-13A0A075B7E8 117 aa15.53■□□□□ 0.08
VARS-218ENST00000459667 IGHV3-74A0A0B4J1X5 117 aa15.53■□□□□ 0.08
VARS-218ENST00000459667 IGKV1-17P01599 117 aa15.53■□□□□ 0.08
VARS-218ENST00000459667 IGLC1P0CG04 106 aa15.53■□□□□ 0.08
VARS-218ENST00000459667 OR1S2Q8NGQ3 325 aa15.53■□□□□ 0.08
VARS-218ENST00000459667 RNF2Q99496 336 aa15.53■□□□□ 0.08
VARS-218ENST00000459667 ZMAT4Q9H898 229 aa15.53■□□□□ 0.08
VARS-218ENST00000459667 PRAF2O60831 178 aa15.52■□□□□ 0.08
VARS-218ENST00000459667 OR10J1P30954 320 aa15.52■□□□□ 0.08
VARS-218ENST00000459667 BMI1P35226 326 aa15.52■□□□□ 0.08
VARS-218ENST00000459667 ID3Q02535 119 aa15.52■□□□□ 0.08
VARS-218ENST00000459667 ZBTB8BQ8NAP8 495 aaPredicted RBP15.52■□□□□ 0.08
VARS-218ENST00000459667 OR4D5Q8NGN0 318 aa15.52■□□□□ 0.08
VARS-218ENST00000459667 NPIPB3Q92617 1050 aa15.52■□□□□ 0.08
VARS-218ENST00000459667 ACY3Q96HD9 319 aa15.52■□□□□ 0.08
VARS-218ENST00000459667 GSKIPQ9P0R6 139 aa15.52■□□□□ 0.08
VARS-218ENST00000459667 C5orf51A6NDU8 294 aa15.51■□□□□ 0.07
VARS-218ENST00000459667 FAM25EA8MYX2 175 aa15.51■□□□□ 0.07
VARS-218ENST00000459667 INMT-MINDY4F8WBC2 141 aa15.51■□□□□ 0.07
VARS-218ENST00000459667 SCGB1D2O95969 90 aa15.51■□□□□ 0.07
VARS-218ENST00000459667 GPX4P36969 197 aaPredicted RBP15.51■□□□□ 0.07
VARS-218ENST00000459667 POLR2GP62487 172 aaKnown RBP eCLIP15.51■□□□□ 0.07
VARS-218ENST00000459667 SLC35E1Q96K37 410 aa15.51■□□□□ 0.07
VARS-218ENST00000459667 RCHY1Q96PM5 261 aa15.51■□□□□ 0.07
VARS-218ENST00000459667 TM2D3Q9BRN9 247 aa15.51■□□□□ 0.07
VARS-218ENST00000459667 STRAPQ9Y3F4 350 aaKnown RBP15.51■□□□□ 0.07
VARS-218ENST00000459667 OR4C46A6NHA9 309 aa15.5■□□□□ 0.07
VARS-218ENST00000459667 CCSO14618 274 aa15.5■□□□□ 0.07
VARS-218ENST00000459667 HAGHQ16775 308 aa15.5■□□□□ 0.07
VARS-218ENST00000459667 SPANXN5Q5MJ07 72 aa15.5■□□□□ 0.07
VARS-218ENST00000459667 ST8SIA2Q92186 375 aa15.5■□□□□ 0.07
VARS-218ENST00000459667 WWC2-AS2Q96NR7 200 aa15.5■□□□□ 0.07
VARS-218ENST00000459667 SSSCA1O60232 199 aa15.49■□□□□ 0.07
VARS-218ENST00000459667 APOHP02749 345 aaPredicted RBP15.49■□□□□ 0.07
VARS-218ENST00000459667 NPPCP23582 126 aa15.49■□□□□ 0.07
VARS-218ENST00000459667 YPEL3P61236 119 aaPredicted RBP15.49■□□□□ 0.07
VARS-218ENST00000459667 GSG1LQ6UXU4 331 aa15.49■□□□□ 0.07
VARS-218ENST00000459667 LINC00322Q6ZN03 302 aaPredicted RBP15.49■□□□□ 0.07
VARS-218ENST00000459667 Q8WTZ3 238 aa15.49■□□□□ 0.07
VARS-218ENST00000459667 METTL26Q96S19 204 aa15.49■□□□□ 0.07
VARS-218ENST00000459667 RAB40CQ96S21 281 aa15.49■□□□□ 0.07
VARS-218ENST00000459667 VSIRQ9H7M9 311 aa15.49■□□□□ 0.07
VARS-218ENST00000459667 IGHV3-66A0A0C4DH42 116 aa15.48■□□□□ 0.07
VARS-218ENST00000459667 SNRPGP15A8MWD9 76 aa15.48■□□□□ 0.07
VARS-218ENST00000459667 MARVELD1Q9BSK0 173 aa15.48■□□□□ 0.07
VARS-218ENST00000459667 TMEM231Q9H6L2 316 aa15.48■□□□□ 0.07
VARS-218ENST00000459667 PSENENQ9NZ42 101 aa15.48■□□□□ 0.07
VARS-218ENST00000459667 UBQLN2Q9UHD9 624 aa15.48■□□□□ 0.07
VARS-218ENST00000459667 IGKV3-7A0A075B6H7 116 aa15.47■□□□□ 0.07
VARS-218ENST00000459667 RBMY1BA6NDE4 496 aaKnown RBP15.47■□□□□ 0.07
VARS-218ENST00000459667 RBMY1EA6NEQ0 496 aaKnown RBP15.47■□□□□ 0.07
VARS-218ENST00000459667 H3BP45 60 aa15.47■□□□□ 0.07
VARS-218ENST00000459667 CD5P06127 495 aa15.47■□□□□ 0.07
VARS-218ENST00000459667 RBMY1DP0C7P1 496 aaKnown RBP15.47■□□□□ 0.07
VARS-218ENST00000459667 FAM90A2PQ658T7 463 aa15.47■□□□□ 0.07
VARS-218ENST00000459667 TCF24Q7RTU0 167 aa15.47■□□□□ 0.07
VARS-218ENST00000459667 SMIM8Q96KF7 97 aa15.47■□□□□ 0.07
VARS-218ENST00000459667 C2orf50Q96LR7 162 aa15.47■□□□□ 0.07
VARS-218ENST00000459667 SPATA25Q9BR10 227 aa15.47■□□□□ 0.07
VARS-218ENST00000459667 HUWE1Q7Z6Z7 4374 aaKnown RBP15.47■□□□□ 0.07
VARS-218ENST00000459667 A0A1W2PS18 150 aa15.46■□□□□ 0.07
VARS-218ENST00000459667 TOMM40O96008 361 aa15.46■□□□□ 0.07
VARS-218ENST00000459667 CRYBB3P26998 211 aa15.46■□□□□ 0.07
VARS-218ENST00000459667 TFPI2P48307 235 aa15.46■□□□□ 0.07
VARS-218ENST00000459667 GAMTQ14353 236 aa15.46■□□□□ 0.07
VARS-218ENST00000459667 ODF3L2Q3SX64 289 aa15.46■□□□□ 0.07
VARS-218ENST00000459667 LILRB2Q8N423 598 aa15.46■□□□□ 0.07
VARS-218ENST00000459667 NARS2Q96I59 477 aaKnown RBP15.46■□□□□ 0.07
VARS-218ENST00000459667 ZFP92A6NM28 416 aa15.45■□□□□ 0.06
VARS-218ENST00000459667 L7N2F9 121 aa15.45■□□□□ 0.06
VARS-218ENST00000459667 DFFBO76075 338 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms