RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 NIT1Q86X76 327 aa15.84■□□□□ 0.13
CNEP1R1-203ENST00000458059 OR2D3Q8NGH3 330 aa15.84■□□□□ 0.13
CNEP1R1-203ENST00000458059 FLYWCH2Q96CP2 140 aaKnown RBP15.84■□□□□ 0.13
CNEP1R1-203ENST00000458059 ASCL3Q9NQ33 180 aa15.84■□□□□ 0.13
CNEP1R1-203ENST00000458059 LY96Q9Y6Y9 160 aa15.84■□□□□ 0.13
CNEP1R1-203ENST00000458059 CUL9Q8IWT3 2517 aa15.83■□□□□ 0.13
CNEP1R1-203ENST00000458059 A0A1B0GWJ7 208 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 hADV38S2A0JD32 116 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 TCF24Q7RTU0 167 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 DLEU1O43261 78 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 FCN3O75636 299 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 LYPD2Q6UXB3 125 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 NUDT10Q8NFP7 164 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 BORCS7Q96B45 105 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 NUDT11Q96G61 164 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 ZNF257Q9Y2Q1 563 aa15.83■□□□□ 0.12
CNEP1R1-203ENST00000458059 IGLV3-9A0A075B6K5 115 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 MBD3L4A6NDZ8 208 aaPredicted RBP15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 MBD3L3A6NE82 208 aaPredicted RBP15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 DPRXA6NFQ7 191 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 MBD3L5A6NJ08 208 aaPredicted RBP15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 LINC00305Q7Z4B0 112 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 ZADH2Q8N4Q0 377 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 NUP35Q8NFH5 326 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 MBD3L2Q8NHZ7 208 aaPredicted RBP15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 RNF2Q99496 336 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 H0YJW9 148 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 DLL1O00548 723 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 RPL19P84098 196 aaKnown RBP15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 C1orf174Q8IYL3 243 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 OR1L8Q8NGR8 309 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 OR5B3Q8NH48 314 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 C18orf32Q8TCD1 76 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 ST6GALNAC6Q969X2 333 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 ZNF430Q9H8G1 570 aaPredicted RBP15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 CHODLQ9H9P2 273 aa15.82■□□□□ 0.12
CNEP1R1-203ENST00000458059 A0A1W2PRE2 83 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 SMIM27A0A1W2PRY6 76 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 HIGD1CA8MV81 97 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 HSBP1O75506 76 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 MT-ND6P03923 174 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 TNFSF4P23510 183 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 CD40P25942 277 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 NDUFA4L2Q9NRX3 87 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 DCHS2Q6V1P9 2916 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 TRBV9A0A0B4J1U6 114 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 PEX7O00628 323 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 HLA-DQA1P01909 254 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 SLC25A5P05141 298 aaKnown RBP15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 ZNF137PP52743 207 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 POU2AF1Q16633 256 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 DMRTA1Q5VZB9 504 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 ZNF841Q6ZN19 808 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 SPACA3Q8IXA5 215 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 KIR3DL3Q8N743 410 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 CLEC7AQ9BXN2 247 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 RAB9BQ9NP90 201 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 CLEC5AQ9NY25 188 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 TLN1Q9Y490 2541 aaKnown RBP15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 TMEM200BQ69YZ2 307 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 Q71RC1 249 aaPredicted RBP15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 FAM222BQ8WU58 562 aa15.81■□□□□ 0.12
CNEP1R1-203ENST00000458059 WNK2Q9Y3S1 2297 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 IZUMO1RA6ND01 250 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 CGB1A6NKQ9 187 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 HINT1P49773 126 aaPredicted RBP15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 ZNF329Q86UD4 541 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 STPG4Q8N801 248 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 BET1LQ9NYM9 111 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 ZNF292O60281 2723 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 C11orf42Q8N5U0 333 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 OR4B1Q8NGF8 309 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 ZNF714Q96N38 554 aa15.8■□□□□ 0.12
CNEP1R1-203ENST00000458059 ASH1LQ9NR48 2969 aaKnown RBP15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 VWC2LB2RUY7 222 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 HYPMO75409 117 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 HNRNPA3P51991 378 aaKnown RBP15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 UBE2G1P62253 170 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 ERASQ7Z444 233 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 PSMB11A5LHX3 300 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 PGPA6NDG6 321 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 H0Y8G0 127 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 M0R2Z0 102 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 OR10J3Q5JRS4 329 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 IGFL2Q6UWQ7 119 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 MCRIP2Q9BUT9 160 aaKnown RBP15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 ARHGAP32A7KAX9 2087 aa15.79■□□□□ 0.12
CNEP1R1-203ENST00000458059 M0QZK8 103 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 ITGB1BP1O14713 200 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 CNTFRP26992 372 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 TBR1Q16650 682 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 C21orf62-AS1Q17RA5 79 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 IGFBPL1Q8WX77 278 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 LOXL4Q96JB6 756 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 TRAV8-1A0A0A6YYK1 113 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 NKX6-3A6NJ46 265 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 TCF21O43680 179 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 GATA4P43694 442 aa15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 LINC00322Q6ZN03 302 aaPredicted RBP15.78■□□□□ 0.12
CNEP1R1-203ENST00000458059 IGKV1D-37A0A075B6S9 117 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms