RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 CCL24O00175 119 aa9.59□□□□□ -0.87
SYNE2-207ENST00000458046 TCF21O43680 179 aa9.59□□□□□ -0.87
SYNE2-207ENST00000458046 JOSD1Q15040 202 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-207ENST00000458046 TMEM170AQ8WVE7 144 aa9.59□□□□□ -0.87
SYNE2-207ENST00000458046 GGCTO75223 188 aaKnown RBP9.59□□□□□ -0.87
SYNE2-207ENST00000458046 ARL14EPLP0DKL9 152 aa9.59□□□□□ -0.87
SYNE2-207ENST00000458046 HIST1H1EP10412 219 aaKnown RBP9.59□□□□□ -0.87
SYNE2-207ENST00000458046 FAM201AQ5SY85 155 aa9.59□□□□□ -0.87
SYNE2-207ENST00000458046 MGST2Q99735 147 aa9.59□□□□□ -0.87
SYNE2-207ENST00000458046 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
SYNE2-207ENST00000458046 ICE1Q9Y2F5 2266 aa9.59□□□□□ -0.87
SYNE2-207ENST00000458046 DVL1O14640 695 aa9.59□□□□□ -0.88
SYNE2-207ENST00000458046 PDE6DO43924 150 aa9.59□□□□□ -0.88
SYNE2-207ENST00000458046 SRP14P37108 136 aaKnown RBP9.59□□□□□ -0.88
SYNE2-207ENST00000458046 PAX2Q02962 417 aa9.59□□□□□ -0.88
SYNE2-207ENST00000458046 SAMD13Q5VXD3 122 aa9.59□□□□□ -0.88
SYNE2-207ENST00000458046 S1PR3Q99500 378 aa9.59□□□□□ -0.88
SYNE2-207ENST00000458046 PXMP4Q9Y6I8 212 aa9.59□□□□□ -0.88
SYNE2-207ENST00000458046 C2CD3Q4AC94 2353 aa9.58□□□□□ -0.88
SYNE2-207ENST00000458046 CA1P00915 261 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-207ENST00000458046 IL3RAP26951 378 aa9.58□□□□□ -0.88
SYNE2-207ENST00000458046 VDAC2P45880 294 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-207ENST00000458046 ZNF83P51522 516 aa9.58□□□□□ -0.88
SYNE2-207ENST00000458046 ERVK-16P61578 105 aa9.58□□□□□ -0.88
SYNE2-207ENST00000458046 GCSAMQ8N6F7 178 aa9.58□□□□□ -0.88
SYNE2-207ENST00000458046 PSMG3-AS1Q96PY0 264 aa9.58□□□□□ -0.88
SYNE2-207ENST00000458046 RBFOX2O43251 390 aaKnown RBP eCLIP9.58□□□□□ -0.88
SYNE2-207ENST00000458046 WT1P19544 449 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-207ENST00000458046 LOXL3P58215 753 aa9.58□□□□□ -0.88
SYNE2-207ENST00000458046 TRIP6Q15654 476 aaKnown RBP9.58□□□□□ -0.88
SYNE2-207ENST00000458046 TRBV20OR9-2A0A075B6H5 130 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 SCO2A0A1W2PP80 73 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 SRRM5B3KS81 715 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 MGST3O14880 152 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 SPRY3O43610 288 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 MT-CO2P00403 227 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 IGLV1-44P01699 117 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 MYOD1P15172 320 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 TCL1AP56279 114 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 COA6Q5JTJ3 125 aaKnown RBP9.57□□□□□ -0.88
SYNE2-207ENST00000458046 SPATA31B1PQ5VZV4 182 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 STUMQ69YW2 141 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 ZNF664Q8N3J9 261 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 OR1B1Q8NGR6 318 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 OR5R1Q8NH85 324 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 STARD4Q96DR4 205 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 ACY3Q96HD9 319 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 GGTLC1Q9BX51 225 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 IFI27L2Q9H2X8 130 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 ZNF71Q9NQZ8 489 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-207ENST00000458046 KCNIP2Q9NS61 270 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 JPT1Q9UK76 154 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 RP1L1Q8IWN7 2480 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-207ENST00000458046 INTS1Q8N201 2190 aaKnown RBP9.57□□□□□ -0.88
SYNE2-207ENST00000458046 TRBV9A0A0B4J1U6 114 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 YPEL1O60688 119 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 OR10J4P0C629 311 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 OPRK1P41145 380 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 THBS3P49746 956 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 UBE2V1Q13404 147 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 OR10J3Q5JRS4 329 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 ZNF474Q6S9Z5 364 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-207ENST00000458046 MTURNQ8N3F0 131 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 SGMS2Q8NHU3 365 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 SARAFQ96BY9 339 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 YPEL2Q96QA6 119 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 TRAPPC1Q9Y5R8 145 aa9.57□□□□□ -0.88
SYNE2-207ENST00000458046 FOXH1O75593 365 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 TNFSF13O75888 250 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 CCKARP32238 428 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 DNLZQ5SXM8 178 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 DUX4L9Q6RFH8 374 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-207ENST00000458046 TCF23Q7RTU1 214 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 PROCRQ9UNN8 238 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 HCFC1P51610 2035 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 F6UZH7 168 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 M0R1B8 84 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 MPDU1O75352 247 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 CALYQ9NYX4 217 aa9.56□□□□□ -0.88
SYNE2-207ENST00000458046 YTHDF2Q9Y5A9 579 aaKnown RBP9.56□□□□□ -0.88
SYNE2-207ENST00000458046 IGF1P05019 195 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 TMPRSS3P57727 454 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 CKS1BP61024 79 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 CT45A1Q5HYN5 189 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 DEFB108BQ8NET1 73 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 CT45A3Q8NHU0 189 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 NPVFQ9HCQ7 196 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 C1RLQ9NZP8 487 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 TENM4Q6N022 2769 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 TINCRA0A1B0GVN0 87 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 CXorf1O96002 111 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 IL6RP08887 468 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-207ENST00000458046 TMEM256Q8N2U0 113 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 TMEM18Q96B42 140 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 SLC25A15Q9Y619 301 aa9.55□□□□□ -0.88
SYNE2-207ENST00000458046 TRAV17A0A0B4J275 112 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 MDFIC2A0A1B0GVS7 189 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 NUPR1O60356 82 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 ITLN1Q8WWA0 313 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 PSG8Q9UQ74 426 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms