RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 CXCL3P19876 107 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 S100A10P60903 97 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 CYCSP99999 105 aaKnown RBP10.72□□□□□ -0.69
SMPD4-215ENST00000457039 TIGITQ495A1 244 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 TM4SF20Q53R12 229 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 TOMM20LQ6UXN7 152 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 ZNF600Q6ZNG1 722 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 HAPLN4Q86UW8 402 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 OR1S2Q8NGQ3 325 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 ACY3Q96HD9 319 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 SLC35E1Q96K37 410 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 ZFAND3Q9H8U3 227 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 UFC1Q9Y3C8 167 aa10.72□□□□□ -0.69
SMPD4-215ENST00000457039 IGKV1D-37A0A075B6S9 117 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 H0YIZ8 118 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 K7EMT4 169 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 L7N2F9 121 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 DEDDO75618 318 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 METTL15P1P0C7V9 234 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 CBLN1P23435 193 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 OR10J1P30954 320 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 YPEL3P61236 119 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-215ENST00000457039 VAMP2P63027 116 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 FCN2Q15485 313 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 ACOT7LQ6ZUV0 252 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 OR11H7Q8NGC8 314 aa10.71□□□□□ -0.69
SMPD4-215ENST00000457039 DAZ1Q9NQZ3 744 aaKnown RBP10.71□□□□□ -0.69
SMPD4-215ENST00000457039 LYRM2Q9NU23 88 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-215ENST00000457039 PUS1Q9Y606 427 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMPD4-215ENST00000457039 IGKV1OR2-108A0A075B7D4 117 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 IGHV3OR16-8A0A075B7F1 116 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 FAM24AA6NFZ4 105 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 SCGB2A1O75556 95 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 PVALBP20472 110 aaPredicted RBP10.7□□□□□ -0.7
SMPD4-215ENST00000457039 ARL16Q0P5N6 197 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 OR8G2PQ6IF36 304 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 PPP1R1CQ8WVI7 109 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 MARC2Q969Z3 335 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 MED28Q9H204 178 aa10.7□□□□□ -0.7
SMPD4-215ENST00000457039 MRPL27Q9P0M9 148 aaKnown RBP10.7□□□□□ -0.7
SMPD4-215ENST00000457039 YIF1AO95070 293 aa10.69□□□□□ -0.7
SMPD4-215ENST00000457039 SCAF4O95104 1147 aaKnown RBP10.69□□□□□ -0.7
SMPD4-215ENST00000457039 RRAS2P62070 204 aaPredicted RBP10.69□□□□□ -0.7
SMPD4-215ENST00000457039 DLK1P80370 383 aa10.69□□□□□ -0.7
SMPD4-215ENST00000457039 DEFB114Q30KQ6 69 aa10.69□□□□□ -0.7
SMPD4-215ENST00000457039 LRRC37A5PQ49AS3 106 aa10.69□□□□□ -0.7
SMPD4-215ENST00000457039 TMEM252Q8N6L7 170 aa10.69□□□□□ -0.7
SMPD4-215ENST00000457039 OR10P1Q8NGE3 313 aa10.69□□□□□ -0.7
SMPD4-215ENST00000457039 C20orf24Q9BUV8 137 aa10.69□□□□□ -0.7
SMPD4-215ENST00000457039 OR5AC2Q9NZP5 309 aa10.69□□□□□ -0.7
SMPD4-215ENST00000457039 ZMAT5Q9UDW3 170 aaKnown RBP10.69□□□□□ -0.7
SMPD4-215ENST00000457039 IGSF23A1L1A6 192 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 FNDC10F2Z333 226 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 ZNF207O43670 478 aaKnown RBP10.68□□□□□ -0.7
SMPD4-215ENST00000457039 MPC2O95563 127 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 TOMM40O96008 361 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 BCAP31P51572 246 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 CAV2P51636 162 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 DEFA6Q01524 100 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 TMEM144Q7Z5S9 345 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 OR2K2Q8NGT1 345 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 TRGV9Q99603 122 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 RNF126Q9BV68 326 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 GGACTQ9BVM4 153 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 AURKAIP1Q9NWT8 199 aaPredicted RBP10.68□□□□□ -0.7
SMPD4-215ENST00000457039 TECRQ9NZ01 308 aaKnown RBP10.68□□□□□ -0.7
SMPD4-215ENST00000457039 MLXQ9UH92 298 aa10.68□□□□□ -0.7
SMPD4-215ENST00000457039 IGHV7-4-1A0A0J9YVY3 117 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 ZFP92A6NM28 416 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 E5RGE8 158 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 CST7O76096 145 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
SMPD4-215ENST00000457039 RLN2P04090 185 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 PSG1P11464 419 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 P2RY1P47900 373 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 SULT1A1P50225 295 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 ZNF90Q03938 601 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 CD300EQ496F6 205 aaPredicted RBP10.67□□□□□ -0.7
SMPD4-215ENST00000457039 Q8WTZ3 238 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 GINS3Q9BRX5 216 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 SMPXQ9UHP9 88 aa10.67□□□□□ -0.7
SMPD4-215ENST00000457039 ZNF256Q9Y2P7 627 aaPredicted RBP10.67□□□□□ -0.7
SMPD4-215ENST00000457039 PRKDCP78527 4128 aaKnown RBP10.67□□□□□ -0.7
SMPD4-215ENST00000457039 TRAV14DV4A0A0A6YYC5 116 aa10.66□□□□□ -0.7
SMPD4-215ENST00000457039 IZUMO1RA6ND01 250 aa10.66□□□□□ -0.7
SMPD4-215ENST00000457039 RD3LP0DJH9 198 aa10.66□□□□□ -0.7
SMPD4-215ENST00000457039 LYL1P12980 280 aa10.66□□□□□ -0.7
SMPD4-215ENST00000457039 BTNL8Q6UX41 500 aa10.66□□□□□ -0.7
SMPD4-215ENST00000457039 DYNLRB2Q8TF09 96 aa10.66□□□□□ -0.7
SMPD4-215ENST00000457039 WI2-2373I1.2A0A1W2PRP0 233 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 CHEK1O14757 476 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 APOHP02749 345 aaPredicted RBP10.65□□□□□ -0.7
SMPD4-215ENST00000457039 IL4P05112 153 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 PET100P0DJ07 73 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 GP9P14770 177 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 CRYBB3P26998 211 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 EWSR1Q01844 656 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMPD4-215ENST00000457039 AKR1C1Q04828 323 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 SLC38A11Q08AI6 406 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms