RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ANXA7P20073 488 aaKnown RBP17.38■□□□□ 0.37
CBX3-204ENST00000456948 OR10J1P30954 320 aa17.38■□□□□ 0.37
CBX3-204ENST00000456948 BTCP35070 178 aa17.38■□□□□ 0.37
CBX3-204ENST00000456948 GPX4P36969 197 aaPredicted RBP17.38■□□□□ 0.37
CBX3-204ENST00000456948 MZT2BQ6NZ67 158 aa17.38■□□□□ 0.37
CBX3-204ENST00000456948 RCHY1Q96PM5 261 aa17.38■□□□□ 0.37
CBX3-204ENST00000456948 SPATA25Q9BR10 227 aa17.38■□□□□ 0.37
CBX3-204ENST00000456948 WRBO00258 174 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 PLA2G10O15496 165 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 SYNGR2O43760 224 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 YPEL3P61236 119 aaPredicted RBP17.37■□□□□ 0.37
CBX3-204ENST00000456948 ACY3Q96HD9 319 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 GRAMD2BQ96HH9 432 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 SLC35E1Q96K37 410 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 RNF2Q99496 336 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 TM2D3Q9BRN9 247 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 WDR12Q9GZL7 423 aaKnown RBP17.37■□□□□ 0.37
CBX3-204ENST00000456948 C20orf85Q9H1P6 137 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 PTTG2Q9NZH5 202 aa17.37■□□□□ 0.37
CBX3-204ENST00000456948 PAIP2BQ9ULR5 123 aaKnown RBP17.37■□□□□ 0.37
CBX3-204ENST00000456948 HAGHQ16775 308 aa17.36■□□□□ 0.37
CBX3-204ENST00000456948 TIGITQ495A1 244 aa17.36■□□□□ 0.37
CBX3-204ENST00000456948 NPIPB3Q92617 1050 aa17.36■□□□□ 0.37
CBX3-204ENST00000456948 MRPL36Q9P0J6 103 aaKnown RBP17.36■□□□□ 0.37
CBX3-204ENST00000456948 IGHV3-49A0A0A0MS15 119 aa17.35■□□□□ 0.37
CBX3-204ENST00000456948 IGKV1-17P01599 117 aa17.35■□□□□ 0.37
CBX3-204ENST00000456948 TCRBP04435 133 aa17.35■□□□□ 0.37
CBX3-204ENST00000456948 FABP1P07148 127 aa17.35■□□□□ 0.37
CBX3-204ENST00000456948 IGLC1P0CG04 106 aa17.35■□□□□ 0.37
CBX3-204ENST00000456948 IAPPP10997 89 aa17.35■□□□□ 0.37
CBX3-204ENST00000456948 EIF2B2P49770 351 aaKnown RBP17.35■□□□□ 0.37
CBX3-204ENST00000456948 RPL11P62913 178 aaKnown RBP17.35■□□□□ 0.37
CBX3-204ENST00000456948 ZNF846Q147U1 533 aa17.35■□□□□ 0.37
CBX3-204ENST00000456948 TMEM170AQ8WVE7 144 aa17.35■□□□□ 0.37
CBX3-204ENST00000456948 ZFAND3Q9H8U3 227 aa17.35■□□□□ 0.37
CBX3-204ENST00000456948 FAM240BA0A1B0GVZ2 78 aa17.34■□□□□ 0.37
CBX3-204ENST00000456948 TCF24Q7RTU0 167 aa17.34■□□□□ 0.37
CBX3-204ENST00000456948 FAM110AQ9BQ89 295 aa17.34■□□□□ 0.37
CBX3-204ENST00000456948 MAGT1Q9H0U3 335 aa17.34■□□□□ 0.37
CBX3-204ENST00000456948 VSIRQ9H7M9 311 aa17.34■□□□□ 0.37
CBX3-204ENST00000456948 PFDN2Q9UHV9 154 aa17.34■□□□□ 0.37
CBX3-204ENST00000456948 IGHV3OR16-13A0A075B7E8 117 aa17.33■□□□□ 0.36
CBX3-204ENST00000456948 IGHV3-74A0A0B4J1X5 117 aa17.33■□□□□ 0.36
CBX3-204ENST00000456948 DNASE2O00115 360 aaPredicted RBP17.33■□□□□ 0.36
CBX3-204ENST00000456948 ADAP1O75689 374 aa17.33■□□□□ 0.36
CBX3-204ENST00000456948 RD3LP0DJH9 198 aa17.33■□□□□ 0.36
CBX3-204ENST00000456948 NKX2-1P43699 371 aaPredicted RBP17.33■□□□□ 0.36
CBX3-204ENST00000456948 MITD1Q8WV92 249 aa17.33■□□□□ 0.36
CBX3-204ENST00000456948 TRAV6A0A075B6T7 132 aa17.32■□□□□ 0.36
CBX3-204ENST00000456948 ST8SIA2Q92186 375 aa17.32■□□□□ 0.36
CBX3-204ENST00000456948 ZNF414Q96IQ9 312 aa17.32■□□□□ 0.36
CBX3-204ENST00000456948 STRAPQ9Y3F4 350 aaKnown RBP17.32■□□□□ 0.36
CBX3-204ENST00000456948 LOC102724200A0A096LPH7 203 aaPredicted RBP17.31■□□□□ 0.36
CBX3-204ENST00000456948 ZFP92A6NM28 416 aa17.31■□□□□ 0.36
CBX3-204ENST00000456948 CRYBB3P26998 211 aa17.31■□□□□ 0.36
CBX3-204ENST00000456948 ID3Q02535 119 aa17.31■□□□□ 0.36
CBX3-204ENST00000456948 LINC00322Q6ZN03 302 aaPredicted RBP17.31■□□□□ 0.36
CBX3-204ENST00000456948 GGTLC1Q9BX51 225 aa17.31■□□□□ 0.36
CBX3-204ENST00000456948 WFDC10AQ9H1F0 79 aa17.31■□□□□ 0.36
CBX3-204ENST00000456948 NUDT15Q9NV35 164 aa17.31■□□□□ 0.36
CBX3-204ENST00000456948 IGKV3-7A0A075B6H7 116 aa17.3■□□□□ 0.36
CBX3-204ENST00000456948 RBMY1BA6NDE4 496 aaKnown RBP17.3■□□□□ 0.36
CBX3-204ENST00000456948 RBMY1EA6NEQ0 496 aaKnown RBP17.3■□□□□ 0.36
CBX3-204ENST00000456948 TOMM40O96008 361 aa17.3■□□□□ 0.36
CBX3-204ENST00000456948 H2AFB2P0C5Z0 115 aa17.3■□□□□ 0.36
CBX3-204ENST00000456948 RBMY1DP0C7P1 496 aaKnown RBP17.3■□□□□ 0.36
CBX3-204ENST00000456948 SPANXN5Q5MJ07 72 aa17.3■□□□□ 0.36
CBX3-204ENST00000456948 FAM90A2PQ658T7 463 aa17.3■□□□□ 0.36
CBX3-204ENST00000456948 IGHV3-66A0A0C4DH42 116 aa17.29■□□□□ 0.36
CBX3-204ENST00000456948 DFFBO76075 338 aa17.29■□□□□ 0.36
CBX3-204ENST00000456948 IL4P05112 153 aa17.29■□□□□ 0.36
CBX3-204ENST00000456948 HNRNPCP07910 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
CBX3-204ENST00000456948 NUP62P37198 522 aaPredicted RBP17.29■□□□□ 0.36
CBX3-204ENST00000456948 TFPI2P48307 235 aa17.29■□□□□ 0.36
CBX3-204ENST00000456948 AP2S1P53680 142 aaPredicted RBP17.29■□□□□ 0.36
CBX3-204ENST00000456948 GAMTQ14353 236 aa17.29■□□□□ 0.36
CBX3-204ENST00000456948 IAH1Q2TAA2 248 aaPredicted RBP17.29■□□□□ 0.36
CBX3-204ENST00000456948 OR51G1Q8NGK1 321 aa17.29■□□□□ 0.36
CBX3-204ENST00000456948 GSKIPQ9P0R6 139 aa17.29■□□□□ 0.36
CBX3-204ENST00000456948 UBQLN2Q9UHD9 624 aa17.29■□□□□ 0.36
CBX3-204ENST00000456948 TRAV2A0A0B4J234 112 aa17.28■□□□□ 0.36
CBX3-204ENST00000456948 HELTA6NFD8 242 aa17.28■□□□□ 0.36
CBX3-204ENST00000456948 APOHP02749 345 aaPredicted RBP17.28■□□□□ 0.36
CBX3-204ENST00000456948 APOC4P55056 127 aa17.28■□□□□ 0.36
CBX3-204ENST00000456948 ASAH1Q13510 395 aa17.28■□□□□ 0.36
CBX3-204ENST00000456948 GBGT1Q8N5D6 347 aa17.28■□□□□ 0.36
CBX3-204ENST00000456948 ENKURQ8TC29 256 aa17.28■□□□□ 0.36
CBX3-204ENST00000456948 ZNF431Q8TF32 576 aaPredicted RBP17.28■□□□□ 0.36
CBX3-204ENST00000456948 PSENENQ9NZ42 101 aa17.28■□□□□ 0.36
CBX3-204ENST00000456948 RABAC1Q9UI14 185 aa17.28■□□□□ 0.36
CBX3-204ENST00000456948 UPK1BO75841 260 aa17.27■□□□□ 0.36
CBX3-204ENST00000456948 P2RY1P47900 373 aa17.27■□□□□ 0.36
CBX3-204ENST00000456948 POLR2GP62487 172 aaKnown RBP eCLIP17.27■□□□□ 0.36
CBX3-204ENST00000456948 OR4D5Q8NGN0 318 aa17.27■□□□□ 0.36
CBX3-204ENST00000456948 RAB40CQ96S21 281 aa17.27■□□□□ 0.36
CBX3-204ENST00000456948 MPTX1A8MV57 137 aa17.26■□□□□ 0.35
CBX3-204ENST00000456948 SNRPGP15A8MWD9 76 aa17.26■□□□□ 0.35
CBX3-204ENST00000456948 SCGB1D2O95969 90 aa17.26■□□□□ 0.35
CBX3-204ENST00000456948 CFDP00746 253 aaPredicted RBP17.26■□□□□ 0.35
CBX3-204ENST00000456948 PSG1P11464 419 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms