RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 BAK1Q16611 211 aa12.06□□□□□ -0.48
CPSF6-203ENST00000456847 PRSS54Q6PEW0 395 aa12.06□□□□□ -0.48
CPSF6-203ENST00000456847 WFDC3Q8IUB2 231 aa12.06□□□□□ -0.48
CPSF6-203ENST00000456847 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
CPSF6-203ENST00000456847 ACY3Q96HD9 319 aa12.06□□□□□ -0.48
CPSF6-203ENST00000456847 U3KQ87 197 aa12.06□□□□□ -0.48
CPSF6-203ENST00000456847 A0A1W2PS18 150 aa12.05□□□□□ -0.48
CPSF6-203ENST00000456847 DNASE2O00115 360 aaPredicted RBP12.05□□□□□ -0.48
CPSF6-203ENST00000456847 OR10J1P30954 320 aa12.05□□□□□ -0.48
CPSF6-203ENST00000456847 VSIRQ9H7M9 311 aa12.05□□□□□ -0.48
CPSF6-203ENST00000456847 NDUFA13Q9P0J0 144 aa12.05□□□□□ -0.48
CPSF6-203ENST00000456847 IGKV1-17P01599 117 aa12.05□□□□□ -0.48
CPSF6-203ENST00000456847 IFNA4P05014 189 aa12.05□□□□□ -0.48
CPSF6-203ENST00000456847 IGLC1P0CG04 106 aa12.05□□□□□ -0.48
CPSF6-203ENST00000456847 RPL35AP18077 110 aaKnown RBP12.05□□□□□ -0.48
CPSF6-203ENST00000456847 CMC4P56277 68 aaPredicted RBP12.05□□□□□ -0.48
CPSF6-203ENST00000456847 FAM90A2PQ658T7 463 aa12.05□□□□□ -0.48
CPSF6-203ENST00000456847 Q8WTZ3 238 aa12.05□□□□□ -0.48
CPSF6-203ENST00000456847 CENPXA8MT69 81 aa12.04□□□□□ -0.48
CPSF6-203ENST00000456847 DFFBO76075 338 aa12.04□□□□□ -0.48
CPSF6-203ENST00000456847 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
CPSF6-203ENST00000456847 LRTM2Q8N967 370 aa12.04□□□□□ -0.48
CPSF6-203ENST00000456847 NPIPB3Q92617 1050 aa12.04□□□□□ -0.48
CPSF6-203ENST00000456847 HOXB5P09067 269 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 IAPPP10997 89 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 UBE2MP61081 183 aaKnown RBP12.03□□□□□ -0.48
CPSF6-203ENST00000456847 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 MAP6D1Q9H9H5 199 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 RABAC1Q9UI14 185 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 PAIP2BQ9ULR5 123 aaKnown RBP12.03□□□□□ -0.48
CPSF6-203ENST00000456847 TMED3Q9Y3Q3 217 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 MED6O75586 246 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 NDUFB6O95139 128 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 LILRB2Q8N423 598 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 MS4A6AQ9H2W1 248 aa12.03□□□□□ -0.48
CPSF6-203ENST00000456847 SLC25A6P12236 298 aa12.02□□□□□ -0.49
CPSF6-203ENST00000456847 CRYBB3P26998 211 aa12.02□□□□□ -0.49
CPSF6-203ENST00000456847 P2RY1P47900 373 aa12.02□□□□□ -0.49
CPSF6-203ENST00000456847 YPEL3P61236 119 aaPredicted RBP12.02□□□□□ -0.49
CPSF6-203ENST00000456847 ZNF124Q15973 351 aa12.02□□□□□ -0.49
CPSF6-203ENST00000456847 STPG3Q8N7X2 389 aa12.02□□□□□ -0.49
CPSF6-203ENST00000456847 STXBP6Q8NFX7 210 aa12.02□□□□□ -0.49
CPSF6-203ENST00000456847 SLC35E1Q96K37 410 aa12.02□□□□□ -0.49
CPSF6-203ENST00000456847 SDHCQ99643 169 aaPredicted RBP12.02□□□□□ -0.49
CPSF6-203ENST00000456847 FAM90A26D6RGX4 464 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 PITX3O75364 302 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 IL4P05112 153 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 HNRNPCP07910 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
CPSF6-203ENST00000456847 IL7P13232 177 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 ATP5IP56385 69 aaPredicted RBP12.01□□□□□ -0.49
CPSF6-203ENST00000456847 RAB11AP62491 216 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 DEFB135Q30KP9 77 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 C7orf50Q9BRJ6 194 aaKnown RBP12.01□□□□□ -0.49
CPSF6-203ENST00000456847 OVOL2Q9BRP0 275 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 KIR2DL5BA0A0G2JN68 375 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 KIR2DL5BA0A0G2JPC4 375 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 C9orf170A2RU37 121 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 UBE2CO00762 179 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 TOMM40O96008 361 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 KIR2DL5AQ8N109 375 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 KIR2DL5BQ8NHK3 375 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 FLVCR2Q9UPI3 526 aa12.01□□□□□ -0.49
CPSF6-203ENST00000456847 TRAV2A0A0B4J234 112 aa12□□□□□ -0.49
CPSF6-203ENST00000456847 EIF2B2P49770 351 aaKnown RBP12□□□□□ -0.49
CPSF6-203ENST00000456847 Q6ZWC4 215 aa12□□□□□ -0.49
CPSF6-203ENST00000456847 COQ8AQ8NI60 647 aa12□□□□□ -0.49
CPSF6-203ENST00000456847 IL17DQ8TAD2 202 aa12□□□□□ -0.49
CPSF6-203ENST00000456847 CIB3Q96Q77 187 aaPredicted RBP12□□□□□ -0.49
CPSF6-203ENST00000456847 MAGT1Q9H0U3 335 aa12□□□□□ -0.49
CPSF6-203ENST00000456847 ZFP92A6NM28 416 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 SPRY2O43597 315 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 RD3LP0DJH9 198 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 DEFB131AP59861 70 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 C4orf46Q504U0 113 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 DNAH7Q8WXX0 4024 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 WRBO00258 174 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 SYNGR2O43760 224 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 OR4E1P0C645 316 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 GPX4P36969 197 aaPredicted RBP11.99□□□□□ -0.49
CPSF6-203ENST00000456847 RPP30P78346 268 aaKnown RBP11.99□□□□□ -0.49
CPSF6-203ENST00000456847 USF2Q15853 346 aaPredicted RBP11.99□□□□□ -0.49
CPSF6-203ENST00000456847 LYG2Q86SG7 212 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 TP53TG1Q9Y2A0 90 aa11.99□□□□□ -0.49
CPSF6-203ENST00000456847 ADAP1O75689 374 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 IFNA21P01568 189 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 ANXA7P20073 488 aaKnown RBP11.98□□□□□ -0.49
CPSF6-203ENST00000456847 BTCP35070 178 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 DHRS2Q13268 280 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 LEMD1Q68G75 181 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 FAM24BQ8N5W8 94 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 PBDC1Q9BVG4 233 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 HELTA6NFD8 242 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 PSG1P11464 419 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 GAMTQ14353 236 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 OR51G1Q8NGK1 321 aa11.98□□□□□ -0.49
CPSF6-203ENST00000456847 KMT2CQ8NEZ4 4911 aaKnown RBP11.97□□□□□ -0.49
CPSF6-203ENST00000456847 K7EQG2 157 aa11.97□□□□□ -0.49
CPSF6-203ENST00000456847 FABP1P07148 127 aa11.97□□□□□ -0.49
CPSF6-203ENST00000456847 C16orf54Q6UWD8 224 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms