RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 NMSQ5H8A3 153 aa13.49□□□□□ -0.25
UBE2D4-208ENST00000454350 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
UBE2D4-208ENST00000454350 CLVS1Q8IUQ0 354 aaPredicted RBP13.49□□□□□ -0.25
UBE2D4-208ENST00000454350 GRAMD2BQ96HH9 432 aa13.49□□□□□ -0.25
UBE2D4-208ENST00000454350 DIRAS2Q96HU8 199 aa13.49□□□□□ -0.25
UBE2D4-208ENST00000454350 HEYLQ9NQ87 328 aaPredicted RBP13.49□□□□□ -0.25
UBE2D4-208ENST00000454350 PRR13Q9NZ81 148 aa13.49□□□□□ -0.25
UBE2D4-208ENST00000454350 RABAC1Q9UI14 185 aa13.49□□□□□ -0.25
UBE2D4-208ENST00000454350 DNAH10Q8IVF4 4471 aa13.49□□□□□ -0.25
UBE2D4-208ENST00000454350 TRAV30A0A087WSZ9 112 aa13.48□□□□□ -0.25
UBE2D4-208ENST00000454350 RND2P52198 227 aa13.48□□□□□ -0.25
UBE2D4-208ENST00000454350 NANOS2P60321 138 aaKnown RBP13.48□□□□□ -0.25
UBE2D4-208ENST00000454350 IL18Q14116 193 aa13.48□□□□□ -0.25
UBE2D4-208ENST00000454350 SLC24A4Q8NFF2 622 aa13.48□□□□□ -0.25
UBE2D4-208ENST00000454350 RNASEH2CQ8TDP1 164 aaKnown RBP13.48□□□□□ -0.25
UBE2D4-208ENST00000454350 GLMPQ8WWB7 406 aa13.48□□□□□ -0.25
UBE2D4-208ENST00000454350 PRRT1Q99946 306 aa13.48□□□□□ -0.25
UBE2D4-208ENST00000454350 YPEL3P61236 119 aaPredicted RBP13.47□□□□□ -0.25
UBE2D4-208ENST00000454350 SUPT4H1P63272 117 aaKnown RBP13.47□□□□□ -0.25
UBE2D4-208ENST00000454350 Q8NAQ8 132 aa13.47□□□□□ -0.25
UBE2D4-208ENST00000454350 STXBP6Q8NFX7 210 aa13.47□□□□□ -0.25
UBE2D4-208ENST00000454350 OR1S2Q8NGQ3 325 aa13.47□□□□□ -0.25
UBE2D4-208ENST00000454350 RAB2BQ8WUD1 216 aa13.47□□□□□ -0.25
UBE2D4-208ENST00000454350 SLIRPQ9GZT3 109 aaKnown RBP13.47□□□□□ -0.25
UBE2D4-208ENST00000454350 RABL2AQ9UBK7 228 aaPredicted RBP13.47□□□□□ -0.25
UBE2D4-208ENST00000454350 RABL2BQ9UNT1 228 aa13.47□□□□□ -0.25
UBE2D4-208ENST00000454350 RPS10-NUDT3A0A1W2PQS6 291 aa13.46□□□□□ -0.25
UBE2D4-208ENST00000454350 DEFB4AO15263 64 aa13.46□□□□□ -0.25
UBE2D4-208ENST00000454350 SLC25A4P12235 298 aa13.46□□□□□ -0.25
UBE2D4-208ENST00000454350 TMBIM6P55061 237 aa13.46□□□□□ -0.25
UBE2D4-208ENST00000454350 USF2Q15853 346 aaPredicted RBP13.46□□□□□ -0.25
UBE2D4-208ENST00000454350 C16orf54Q6UWD8 224 aa13.46□□□□□ -0.25
UBE2D4-208ENST00000454350 RPP25LQ8N5L8 163 aaKnown RBP13.46□□□□□ -0.25
UBE2D4-208ENST00000454350 IL22RA2Q969J5 263 aa13.46□□□□□ -0.25
UBE2D4-208ENST00000454350 BCL7BQ9BQE9 202 aa13.46□□□□□ -0.25
UBE2D4-208ENST00000454350 KNCNA6PVL3 124 aa13.45□□□□□ -0.26
UBE2D4-208ENST00000454350 CEBPZOSA8MTT3 80 aa13.45□□□□□ -0.26
UBE2D4-208ENST00000454350 ZNF688P0C7X2 276 aa13.45□□□□□ -0.26
UBE2D4-208ENST00000454350 C4BPBP20851 252 aa13.45□□□□□ -0.26
UBE2D4-208ENST00000454350 OR10J1P30954 320 aa13.45□□□□□ -0.26
UBE2D4-208ENST00000454350 STHQ8IWL8 128 aa13.45□□□□□ -0.26
UBE2D4-208ENST00000454350 C11orf45Q8TAV5 145 aa13.45□□□□□ -0.26
UBE2D4-208ENST00000454350 DNAH6Q9C0G6 4158 aa13.45□□□□□ -0.26
UBE2D4-208ENST00000454350 RBMY1A1P0DJD3 496 aaKnown RBP13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 RBMY1CP0DJD4 496 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 SULT1A3P0DMM9 295 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 SULT1A4P0DMN0 295 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 NPY1RP25929 384 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 TNFSF8P32971 234 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 RBMY1FQ15415 496 aaKnown RBP13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 LGALS9CQ6DKI2 356 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 CSNK1G2-AS1Q8NCQ2 148 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 Q8WTZ3 238 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 NPIPB3Q92617 1050 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 HSPB7Q9UBY9 170 aa13.44□□□□□ -0.26
UBE2D4-208ENST00000454350 H3BMQ9 156 aa13.43□□□□□ -0.26
UBE2D4-208ENST00000454350 SCGB2A1O75556 95 aa13.43□□□□□ -0.26
UBE2D4-208ENST00000454350 HNRNPCP07910 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
UBE2D4-208ENST00000454350 LYZL2Q7Z4W2 148 aa13.43□□□□□ -0.26
UBE2D4-208ENST00000454350 MFFQ9GZY8 342 aa13.43□□□□□ -0.26
UBE2D4-208ENST00000454350 FBXL17Q9UF56 701 aa13.43□□□□□ -0.26
UBE2D4-208ENST00000454350 RSL24D1Q9UHA3 163 aaKnown RBP13.43□□□□□ -0.26
UBE2D4-208ENST00000454350 X6R8D5 127 aa13.43□□□□□ -0.26
UBE2D4-208ENST00000454350 A0A0B4J2A0 478 aa13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 ZNF705EA8MWA4 302 aaPredicted RBP13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 BUB3O43684 328 aa13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 DEDDO75618 318 aa13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 TOMM40O96008 361 aa13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 SPP1P10451 314 aa13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 MORN3Q6PF18 240 aaPredicted RBP13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 NARS2Q96I59 477 aaKnown RBP13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 SHPKQ9UHJ6 478 aa13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 SCP2D1Q9UJQ7 156 aa13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 KCNIP3Q9Y2W7 256 aa13.42□□□□□ -0.26
UBE2D4-208ENST00000454350 IGHV4-28A0A0C4DH34 117 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 HELTA6NFD8 242 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 IL4P05112 153 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 CCR6P51684 374 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 DHRS2Q13268 280 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 SMCO1Q147U7 214 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 ACTL10Q5JWF8 245 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 ETFRF1Q6IPR1 90 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 ACY3Q96HD9 319 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 RAB40CQ96S21 281 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 RBKSQ9H477 322 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 CACFD1Q9UGQ2 172 aa13.41□□□□□ -0.26
UBE2D4-208ENST00000454350 FAM90A26D6RGX4 464 aa13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 PSG1P11464 419 aa13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 AKR1C4P17516 323 aa13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 KLF9Q13886 244 aaPredicted RBP13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 TMEM41BQ5BJD5 291 aa13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 DTD1Q8TEA8 209 aa13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 TRIM63Q969Q1 353 aa13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 SCGB3A2Q96PL1 93 aa13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 HRH4Q9H3N8 390 aa13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 U3KQ87 197 aa13.4□□□□□ -0.26
UBE2D4-208ENST00000454350 IGKV1D-37A0A075B6S9 117 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 ELOA3CA0A087WX78 387 aaPredicted RBP13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 FABP12A6NFH5 140 aa13.39□□□□□ -0.27
UBE2D4-208ENST00000454350 PITX3O75364 302 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms