RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 TNFAIP6P98066 277 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-210ENST00000453744 C12orf54Q6X4T0 127 aa11.36□□□□□ -0.59
UBE2D3-210ENST00000453744 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
UBE2D3-210ENST00000453744 KIAA1549Q9HCM3 1950 aa11.36□□□□□ -0.59
UBE2D3-210ENST00000453744 A0A1W2PRE2 83 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 UTF1Q5T230 341 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 SLC25A33Q9BSK2 321 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 IGKV1D-17A0A075B6S4 117 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 P0C879 139 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 PRB3Q04118 309 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 RNFT1Q5M7Z0 435 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 KIR3DL3Q8N743 410 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 SLC25A10Q9UBX3 287 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 NAV3Q8IVL0 2385 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 DYSFO75923 2080 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 RBP4P02753 201 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 SAA1P0DJI8 122 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 TM4SF20Q53R12 229 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 DUX4L9Q6RFH8 374 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 GP6Q9HCN6 339 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 HILPDAQ9Y5L2 63 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 CREBBPQ92793 2442 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 COMPP49747 757 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 MORN5Q5VZ52 161 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 CHODLQ9H9P2 273 aa11.35□□□□□ -0.59
UBE2D3-210ENST00000453744 TMEM265A0A087WTH1 108 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 IGHV1-69-2A0A0G2JMI3 117 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 C9orf172C9J069 976 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 SLC25A17O43808 307 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 LINC00173Q6ZV60 143 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 C11orf52Q96A22 123 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 TANC2Q9HCD6 1990 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 ARF6P62330 175 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 FNDC4Q9H6D8 234 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 ZNF430Q9H8G1 570 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 LY96Q9Y6Y9 160 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 IGHV2OR16-5A0A0B4J2B6 119 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 Q6ZT83 130 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 Q8N7P7 452 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 ZPBPQ9BS86 351 aa11.34□□□□□ -0.59
UBE2D3-210ENST00000453744 DLL1O00548 723 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 C11orf53Q8IXP5 236 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 MRPS16Q9Y3D3 137 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 LSM4Q9Y4Z0 139 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 TRAV8-1A0A0A6YYK1 113 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 TEX50A0A1B0GTY4 177 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 C15orf65H3BRN8 121 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 CD69Q07108 199 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 WFDC3Q8IUB2 231 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 UPK2O00526 184 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 HLA-DRB1P01911 266 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 NBEAP1P0C6P0 100 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 NMUP48645 174 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 FXYD7P58549 80 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 ZCCHC24Q8N2G6 241 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 GCSAMQ8N6F7 178 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 SRSF12Q8WXF0 261 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 CCL17Q92583 94 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 RNF7Q9UBF6 113 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 PIEZO2Q9H5I5 2752 aa11.33□□□□□ -0.6
UBE2D3-210ENST00000453744 GOLT1AQ6ZVE7 132 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 ARL6IP6Q8N6S5 226 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 SARAFQ96BY9 339 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 PERPQ96FX8 193 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 MRPL20Q9BYC9 149 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 TMEM11P17152 192 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 BHLHA15Q7RTS1 189 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 HSPB8Q9UJY1 196 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 KBTBD11-OT1A0A1B0GTJ5 212 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 FCER1GP30273 86 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 PRR20EP86478 221 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 PRR20CP86479 221 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 PRR20DP86480 221 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 PRR20BP86481 221 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 PRR20AP86496 221 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
UBE2D3-210ENST00000453744 IGKV1OR2-108A0A075B7D4 117 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 J3QW42 95 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 SS18L1O75177 396 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 ESDP10768 282 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 CCL3L1P16619 93 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 PNKDQ8N490 385 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 PTPRQQ9UMZ3 2332 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 IGHV2-26A0A0B4J1V2 119 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 CNIH1O95406 144 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 CT45A10P0DMU9 189 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 MEGF9Q9H1U4 602 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 FOXA2Q9Y261 457 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 TRGV8A0A0C4DH27 118 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 APOHP02749 345 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 CSN1S1P47710 185 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 SSBP2P81877 361 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 C9orf106Q8NAJ2 232 aa11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 RPP21Q9H633 154 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 MRPL27Q9P0M9 148 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-210ENST00000453744 SYS1-DBNDD2H3BUS1 97 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms