RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 MT-CO2P00403 227 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 GATA2P23769 480 aaPredicted RBP9.8□□□□□ -0.84
COL27A1-202ENST00000451716 CDSNQ15517 529 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 TEPPQ6URK8 271 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 C16orf82Q7Z2V1 217 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 STPG3Q8N7X2 389 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 NEIL1Q96FI4 390 aaPredicted RBP9.8□□□□□ -0.84
COL27A1-202ENST00000451716 VKORC1Q9BQB6 163 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 VAMP8Q9BV40 100 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 NGBQ9NPG2 151 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 PRNDQ9UKY0 176 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 GAGE12BA1L429 117 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 PGPEP1LA6NFU8 196 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 FOXH1O75593 365 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 ACTL6BO94805 426 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 LOXP28300 417 aaPredicted RBP9.79□□□□□ -0.84
COL27A1-202ENST00000451716 HINT1P49773 126 aaPredicted RBP9.79□□□□□ -0.84
COL27A1-202ENST00000451716 RHOGP84095 191 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 SMAGPQ0VAQ4 97 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 POU2AF1Q16633 256 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 C10orf55Q5SWW7 151 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 IGHV3-72A0A0B4J1Y9 119 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 IGHV1-69-2A0A0G2JMI3 117 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 TNFRSF13BO14836 293 aaPredicted RBP9.79□□□□□ -0.84
COL27A1-202ENST00000451716 NDUFB4O95168 129 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 SCGB1A1P11684 91 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 CD33P20138 364 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 GNB1P62873 340 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 PRCDQ00LT1 54 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 MS4A10Q96PG2 267 aa9.79□□□□□ -0.84
COL27A1-202ENST00000451716 IGKV1OR2-108A0A075B7D4 117 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 AZU1P20160 251 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 DPF1Q92782 380 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 RITA1Q96K30 269 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 HRNRQ86YZ3 2850 aaPredicted RBP9.78□□□□□ -0.84
COL27A1-202ENST00000451716 MED13LQ71F56 2210 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 IGHV3-48P01763 117 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 APOA2P02652 100 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 CD3EP07766 207 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 ID1P41134 155 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 RND2P52198 227 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 EFNB3Q15768 340 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 PSG3Q16557 428 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 MSRB2Q9Y3D2 182 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 ARHGAP32A7KAX9 2087 aa9.78□□□□□ -0.84
COL27A1-202ENST00000451716 TRAV34A0A0B4J273 112 aa9.77□□□□□ -0.84
COL27A1-202ENST00000451716 FLYWCH2Q96CP2 140 aaKnown RBP9.77□□□□□ -0.84
COL27A1-202ENST00000451716 TMEM242Q9NWH2 141 aa9.77□□□□□ -0.84
COL27A1-202ENST00000451716 G3V4G9 280 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 CCL21O00585 134 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 LY6HO94772 140 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 TEX43Q6ZNM6 134 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 TCF24Q7RTU0 167 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 OR5AN1Q8NGI8 311 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 RAB1CQ92928 201 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 AKAP6Q13023 2319 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.85
COL27A1-202ENST00000451716 TMEM249Q2WGJ8 235 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 TMEM30BQ3MIR4 351 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 ZNF114Q8NC26 417 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 OR9G1Q8NH87 305 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 NABP2Q9BQ15 211 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 COMMD5Q9GZQ3 224 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 GTSF1LQ9H1H1 148 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 TPSG1Q9NRR2 321 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 BET1LQ9NYM9 111 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 SS18L2Q9UHA2 77 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 ZNF257Q9Y2Q1 563 aa9.77□□□□□ -0.85
COL27A1-202ENST00000451716 YTHDF2Q9Y5A9 579 aaKnown RBP9.77□□□□□ -0.85
COL27A1-202ENST00000451716 PIEZO1Q92508 2521 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 H7BYZ3 331 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 CNIH1O95406 144 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 RPL8P62917 257 aaKnown RBP9.76□□□□□ -0.85
COL27A1-202ENST00000451716 Q6ZN92 141 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 MIR17HGQ75NE6 70 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 OR8I2Q8N0Y5 310 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 OR4P4Q8NGL7 312 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 OSR1Q8TAX0 266 aaPredicted RBP9.76□□□□□ -0.85
COL27A1-202ENST00000451716 SCO2A0A1W2PP80 73 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 ENSAO43768 121 aaKnown RBP9.76□□□□□ -0.85
COL27A1-202ENST00000451716 DLX6P56179 175 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 FAM78BQ5VT40 261 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 MUC15Q8N387 334 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 OR2T6Q8NHC8 308 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 ACY3Q96HD9 319 aa9.76□□□□□ -0.85
COL27A1-202ENST00000451716 TRBV7-9A0A0J9YWB2 115 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 CXorf1O96002 111 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 LINC00869P0C866 280 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 APELAP0DMC3 54 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 IGHV1-8P0DP01 117 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 RNASE2P10153 161 aaKnown RBP9.75□□□□□ -0.85
COL27A1-202ENST00000451716 GALR1P47211 349 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 TMEM155Q4W5P6 130 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 CTDSP1Q9GZU7 261 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 ITPR1Q14643 2758 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 TRBV20OR9-2A0A075B6H5 130 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 A4D1N5 150 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 SIVA1O15304 175 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 REG1AP05451 166 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 PFN1P07737 140 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms