RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 LINC00205P59089 165 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 GALMQ96C23 342 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 CHRNA10Q9GZZ6 450 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 CYSLTR1Q9Y271 337 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 AMMECR1Q9Y4X0 333 aaPredicted RBP7.02□□□□□ -1.29
LSM5-208ENST00000450169 K7ERJ3 54 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 CHEK1O14757 476 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 KLK10O43240 276 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 CER1O95813 267 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 OR2H2O95918 312 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 GABRG2P18507 467 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 GCSHP23434 173 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 INSL3P51460 131 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 ZNF137PP52743 207 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 CR1LQ2VPA4 569 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 FAM53AQ6NSI3 398 aaPredicted RBP7.02□□□□□ -1.29
LSM5-208ENST00000450169 FAM110AQ9BQ89 295 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 F11RQ9Y624 299 aaKnown RBP7.02□□□□□ -1.29
LSM5-208ENST00000450169 UNC13CQ8NB66 2214 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 CNTRLQ7Z7A1 2325 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 SPTY2D1-AS1A0A0U1RR47 76 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 A0A1B0GX78 115 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 FNDC10F2Z333 226 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 CT45A6P0DMU7 189 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 CT45A5P0DMU8 189 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 CT45A7P0DMV0 189 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 KIR2DL2P43627 348 aaPredicted RBP7.01□□□□□ -1.29
LSM5-208ENST00000450169 NMUP48645 174 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 FXYD2P54710 66 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 HERV-K104P63124 156 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 CT45A1Q5HYN5 189 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 PCP2Q8IVA1 136 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 CT45A3Q8NHU0 189 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 C7orf69Q9H7B7 122 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 TRBV7-9A0A0J9YWB2 115 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 LILRA5A6NI73 299 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 FAM90A9PA6NNJ1 464 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 ZNF716A6NP11 495 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 H3BMG7 143 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 PEX7O00628 323 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 NKX2-8O15522 239 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 ZNHIT1O43257 154 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 APOHP02749 345 aaPredicted RBP7.01□□□□□ -1.29
LSM5-208ENST00000450169 DUTP33316 252 aaKnown RBP7.01□□□□□ -1.29
LSM5-208ENST00000450169 UBE2L3P68036 154 aaKnown RBP7.01□□□□□ -1.29
LSM5-208ENST00000450169 GAGE5Q13069 117 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 GAGE6Q13070 117 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 YAF2Q8IY57 180 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 BCL6BQ8N143 479 aaPredicted RBP7.01□□□□□ -1.29
LSM5-208ENST00000450169 OR8A1Q8NGG7 326 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 ZNF502Q8TBZ5 544 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 PHLDA1Q8WV24 401 aaPredicted RBP7.01□□□□□ -1.29
LSM5-208ENST00000450169 PGLYRP4Q96LB8 373 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 C20orf78Q9BR46 151 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 RPP21Q9H633 154 aaKnown RBP7.01□□□□□ -1.29
LSM5-208ENST00000450169 B4GALT7Q9UBV7 327 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 LINC00312Q9Y6C7 94 aa7.01□□□□□ -1.29
LSM5-208ENST00000450169 TNRC6BQ9UPQ9 1833 aaKnown RBP7□□□□□ -1.29
LSM5-208ENST00000450169 ABCA7Q8IZY2 2146 aa7□□□□□ -1.29
LSM5-208ENST00000450169 C12orf77C9JDV5 145 aa7□□□□□ -1.29
LSM5-208ENST00000450169 E9PLD3 99 aa7□□□□□ -1.29
LSM5-208ENST00000450169 C8orf88P0DMB2 117 aa7□□□□□ -1.29
LSM5-208ENST00000450169 HOXB4P17483 251 aaPredicted RBP7□□□□□ -1.29
LSM5-208ENST00000450169 GNG3P63215 75 aa7□□□□□ -1.29
LSM5-208ENST00000450169 SRXN1Q9BYN0 137 aa7□□□□□ -1.29
LSM5-208ENST00000450169 MUC3AQ02505 3323 aa7□□□□□ -1.29
LSM5-208ENST00000450169 KNL1Q8NG31 2342 aa7□□□□□ -1.29
LSM5-208ENST00000450169 CCL2P13500 99 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 TNFRSF4P43489 277 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 LGALS9BQ3B8N2 356 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 GAGE13Q4V321 117 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 LGALS9CQ6DKI2 356 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 AAED1Q7RTV5 226 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 SYT8Q8NBV8 401 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 ANAPC13Q9BS18 74 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 PKIBQ9C010 78 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 TCF19Q9Y242 345 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 COL6A3P12111 3177 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 DMDP11532 3685 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 TRGV8A0A0C4DH27 118 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 A0A0J9YW62 118 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 TNFRSF13BO14836 293 aaPredicted RBP6.99□□□□□ -1.29
LSM5-208ENST00000450169 FCGR3BO75015 233 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 APOMO95445 188 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 NGFP01138 241 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 MT-ATP8P03928 68 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 CACNG7P62955 275 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 SSBP2P81877 361 aaPredicted RBP6.99□□□□□ -1.29
LSM5-208ENST00000450169 KLRD1Q13241 179 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 RBPMS2Q6ZRY4 209 aaKnown RBP6.99□□□□□ -1.29
LSM5-208ENST00000450169 CXorf67Q86X51 503 aaPredicted RBP6.99□□□□□ -1.29
LSM5-208ENST00000450169 VKORC1L1Q8N0U8 176 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 SLC25A33Q9BSK2 321 aa6.99□□□□□ -1.29
LSM5-208ENST00000450169 NHP2Q9NX24 153 aaKnown RBP6.99□□□□□ -1.29
LSM5-208ENST00000450169 ASCC3Q8N3C0 2202 aaKnown RBP6.99□□□□□ -1.29
LSM5-208ENST00000450169 FER1L5A0AVI2 2057 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 TRIOBPQ9H2D6 2365 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 TCRBV4S1A1TA0A5B7 111 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 hADV38S2A0JD32 116 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 J3QT63 122 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms