RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 ZNF124Q15973 351 aa12.8□□□□□ -0.36
CLTCL1-203ENST00000449918 TIGITQ495A1 244 aa12.8□□□□□ -0.36
CLTCL1-203ENST00000449918 PYDC2Q56P42 97 aa12.8□□□□□ -0.36
CLTCL1-203ENST00000449918 LGI3Q8N145 548 aa12.8□□□□□ -0.36
CLTCL1-203ENST00000449918 Q8WTZ3 238 aa12.8□□□□□ -0.36
CLTCL1-203ENST00000449918 GRAMD2BQ96HH9 432 aa12.8□□□□□ -0.36
CLTCL1-203ENST00000449918 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
CLTCL1-203ENST00000449918 CXorf65A6NEN9 183 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 CCDC160A6NGH7 325 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 ATF4P18848 351 aaPredicted RBP12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 NPY1RP25929 384 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 S100A5P33763 92 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 RND2P52198 227 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 SMCO1Q147U7 214 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 PRSS54Q6PEW0 395 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 TOMM5Q8N4H5 51 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 PRR13Q9NZ81 148 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 RABAC1Q9UI14 185 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 U3KQ87 197 aa12.79□□□□□ -0.36
CLTCL1-203ENST00000449918 STARD9Q9P2P6 4700 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 NXPH3O95157 252 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 IFNA10P01566 189 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 IGLC1P0CG04 106 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 OR10J1P30954 320 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 P2RY1P47900 373 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 EIF2B2P49770 351 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 DEFB131AP59861 70 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 YPEL3P61236 119 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 SUPT4H1P63272 117 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 KLF9Q13886 244 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 LYZL2Q7Z4W2 148 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 GATAD1Q8WUU5 269 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 HSPB7Q9UBY9 170 aa12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 DYNC2H1Q8NCM8 4307 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-203ENST00000449918 TMED4Q7Z7H5 227 aa12.77□□□□□ -0.37
CLTCL1-203ENST00000449918 STXBP6Q8NFX7 210 aa12.77□□□□□ -0.37
CLTCL1-203ENST00000449918 DTD1Q8TEA8 209 aa12.77□□□□□ -0.37
CLTCL1-203ENST00000449918 DEDD2Q8WXF8 326 aa12.77□□□□□ -0.37
CLTCL1-203ENST00000449918 NUPR2A6NF83 97 aa12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 AP2S1P53680 142 aaPredicted RBP12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 ATP5IP56385 69 aaPredicted RBP12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 PMS2P11Q13670 270 aa12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 RBMS2Q15434 407 aaKnown RBP12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 TMEM128Q5BJH2 165 aa12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 TMEM170AQ8WVE7 144 aa12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 NPIPB3Q92617 1050 aa12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 TRIM63Q969Q1 353 aa12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 ACY3Q96HD9 319 aa12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 RARRES2Q99969 163 aa12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 SLC25A21Q9BQT8 299 aaPredicted RBP12.76□□□□□ -0.37
CLTCL1-203ENST00000449918 RYR2Q92736 4967 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 DUXBA0A1W2PPF3 345 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 HELTA6NFD8 242 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 K7EQG2 157 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 HNRNPCP07910 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 RD3LP0DJH9 198 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 STHQ8IWL8 128 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 OR1S1Q8NH92 325 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 RBKSQ9H477 322 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 U3KQE9 123 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 V9GYH0 126 aa12.75□□□□□ -0.37
CLTCL1-203ENST00000449918 CA1P00915 261 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-203ENST00000449918 IFNA4P05014 189 aa12.74□□□□□ -0.37
CLTCL1-203ENST00000449918 EWSR1Q01844 656 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLTCL1-203ENST00000449918 CEMP1Q6PRD7 247 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-203ENST00000449918 FAM24BQ8N5W8 94 aa12.74□□□□□ -0.37
CLTCL1-203ENST00000449918 TOMM40O96008 361 aa12.73□□□□□ -0.37
CLTCL1-203ENST00000449918 IL4P05112 153 aa12.73□□□□□ -0.37
CLTCL1-203ENST00000449918 VAMP1P23763 118 aa12.73□□□□□ -0.37
CLTCL1-203ENST00000449918 OR11H2Q8NH07 326 aa12.73□□□□□ -0.37
CLTCL1-203ENST00000449918 KLK5Q9Y337 293 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-203ENST00000449918 ZNF688P0C7X2 276 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 GPX4P36969 197 aaPredicted RBP12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 DHRS2Q13268 280 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 ZNF79Q15937 498 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 TMEM41BQ5BJD5 291 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 SPANXN2Q5MJ10 180 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 C16orf54Q6UWD8 224 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 CCDC190Q86UF4 302 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 LRTM2Q8N967 370 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 DCANP1Q8TF63 244 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 GLMPQ8WWB7 406 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 PFDN2Q9UHV9 154 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 SACSQ9NZJ4 4579 aa12.72□□□□□ -0.37
CLTCL1-203ENST00000449918 ZNF701M0R085 212 aaPredicted RBP12.71□□□□□ -0.37
CLTCL1-203ENST00000449918 PITX3O75364 302 aa12.71□□□□□ -0.37
CLTCL1-203ENST00000449918 MED6O75586 246 aa12.71□□□□□ -0.37
CLTCL1-203ENST00000449918 PSG1P11464 419 aa12.71□□□□□ -0.37
CLTCL1-203ENST00000449918 SLC25A6P12236 298 aa12.71□□□□□ -0.37
CLTCL1-203ENST00000449918 USF2Q15853 346 aaPredicted RBP12.71□□□□□ -0.37
CLTCL1-203ENST00000449918 MORN3Q6PF18 240 aaPredicted RBP12.71□□□□□ -0.37
CLTCL1-203ENST00000449918 LYSTQ99698 3801 aa12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 ZFP92A6NM28 416 aa12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 SFT2D2O95562 160 aa12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 FABP1P07148 127 aa12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 SPP1P10451 314 aa12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 NUP62P37198 522 aaPredicted RBP12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 RAB11AP62491 216 aa12.7□□□□□ -0.38
CLTCL1-203ENST00000449918 OR51G1Q8NGK1 321 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms