RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RNF7Q9UBF6 113 aa10.21□□□□□ -0.77
UBE3B-204ENST00000449510 WDFY4Q6ZS81 3184 aa10.21□□□□□ -0.78
UBE3B-204ENST00000449510 TRAV8-6A0A0B4J262 113 aa10.21□□□□□ -0.78
UBE3B-204ENST00000449510 FOXL2NBQ6ZUU3 175 aa10.21□□□□□ -0.78
UBE3B-204ENST00000449510 TMEM144Q7Z5S9 345 aa10.21□□□□□ -0.78
UBE3B-204ENST00000449510 PPP1R14DQ9NXH3 145 aa10.21□□□□□ -0.78
UBE3B-204ENST00000449510 ZNF207O43670 478 aaKnown RBP10.2□□□□□ -0.78
UBE3B-204ENST00000449510 NDUFB3O43676 98 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 CKS2P33552 79 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 RIGQ13278 110 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 TWIST1Q15672 202 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 MTURNQ8N3F0 131 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 CD177Q8N6Q3 437 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 DEFB104AQ8WTQ1 72 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 V9GYV3 84 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 LOC102723996A0A087X1L8 192 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 GGTLC3B5MD39 225 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 J3QR89 54 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 GOSR1O95249 250 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 WNT2P09544 360 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 SAA1P0DJI8 122 aaPredicted RBP10.2□□□□□ -0.78
UBE3B-204ENST00000449510 CD40P25942 277 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 ZNF146Q15072 292 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 LINC00173Q6ZV60 143 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 CIARTQ8N365 385 aaPredicted RBP10.2□□□□□ -0.78
UBE3B-204ENST00000449510 RASL11BQ9BPW5 248 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 TMUB1Q9BVT8 246 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 LINC00470Q9BZP3 86 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 CST9LQ9H4G1 147 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 JPT1Q9UK76 154 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 OBSL1O75147 1896 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 FRYLO94915 3013 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 ETV2O00321 342 aaPredicted RBP10.2□□□□□ -0.78
UBE3B-204ENST00000449510 MLNRO43193 412 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 OR10J3Q5JRS4 329 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 AAMDCQ9H7C9 122 aa10.2□□□□□ -0.78
UBE3B-204ENST00000449510 AHRRA9YTQ3 701 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 LIPFP07098 398 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 FABP2P12104 132 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 COLCA1Q6ZS62 124 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 ORAOV1Q8WV07 137 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 GRAMD2BQ96HH9 432 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 RNF114Q9Y508 228 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 WNK1Q9H4A3 2382 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 C15orf61A6NNL5 157 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 FCGR2BP31994 310 aaPredicted RBP10.19□□□□□ -0.78
UBE3B-204ENST00000449510 Q6ZS49 121 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 EXOC3-AS1Q8N2X6 119 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 MRPL20Q9BYC9 149 aaKnown RBP10.19□□□□□ -0.78
UBE3B-204ENST00000449510 SLC25A10Q9UBX3 287 aaPredicted RBP10.19□□□□□ -0.78
UBE3B-204ENST00000449510 SPCS1Q9Y6A9 102 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 PPIFP30405 207 aaKnown RBP10.19□□□□□ -0.78
UBE3B-204ENST00000449510 DLX1P56177 255 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 GP6Q9HCN6 339 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 PRDM6Q9NQX0 595 aa10.19□□□□□ -0.78
UBE3B-204ENST00000449510 EYSQ5T1H1 3165 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 DLL1O00548 723 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 AREGP15514 252 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 PDLIM4P50479 330 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 PMS2CLQ68D20 193 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 PRSS57Q6UWY2 283 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 SPACA3Q8IXA5 215 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 INSIG2Q9Y5U4 225 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 ZNF785A8K8V0 405 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.18□□□□□ -0.78
UBE3B-204ENST00000449510 SELENOTP62341 195 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 CACNG7P62955 275 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 Q0VG73 95 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 DUX4L9Q6RFH8 374 aaPredicted RBP10.18□□□□□ -0.78
UBE3B-204ENST00000449510 OR10AG1Q8NH19 301 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 RPEQ96AT9 228 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 GTSF1LQ9H1H1 148 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 OCIAD2Q56VL3 154 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 Q6ZR03 302 aa10.18□□□□□ -0.78
UBE3B-204ENST00000449510 TGFAP01135 160 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 IGHV3-23P01764 117 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 ZNF134P52741 427 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 PSG9Q00887 426 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 LRRC10Q5BKY1 277 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 EBLN2Q6P2I7 272 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 GPR82Q96P67 336 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 RPP21Q9H633 154 aaKnown RBP10.17□□□□□ -0.78
UBE3B-204ENST00000449510 A1L4Q6 167 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 ACP1P24666 158 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 SLC25A33Q9BSK2 321 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 MBNL3Q9NUK0 354 aaKnown RBP10.17□□□□□ -0.78
UBE3B-204ENST00000449510 PILRBQ9UKJ0 227 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 HIGD1AQ9Y241 93 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 IGHV3-49A0A0A0MS15 119 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 LOC107984156A0A0G2JMH3 177 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 IGHV1-69-2A0A0G2JMI3 117 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 H3BVH4 76 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 SCGB1C2P0DMR2 95 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 GAGE1Q13065 139 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 ARL17AQ8IVW1 177 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 TEX45Q8NA69 505 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 TMEM160Q9NX00 188 aa10.17□□□□□ -0.78
UBE3B-204ENST00000449510 MRPS18CQ9Y3D5 142 aaKnown RBP10.17□□□□□ -0.78
UBE3B-204ENST00000449510 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms