RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 EML5Q05BV3 1969 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 HYPMO75409 117 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 LOXP28300 417 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 LSAMPQ13449 338 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF56Q15929 161 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM183AQ8IXX5 376 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 TEX45Q8NA69 505 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 GNPNAT1Q96EK6 184 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 MAP1LC3AQ9H492 121 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 NAA60Q9H7X0 242 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 KMT2EQ8IZD2 1858 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 SPRY2O43597 315 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 AMY1AP04745 511 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 UBE2MP61081 183 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 SRSF9Q13242 221 aaKnown RBP eCLIP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF146Q15072 292 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 AJUBAQ96IF1 538 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 NCOR1P1Q9H4R4 102 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 FGF7P21781 194 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 FGF9P31371 208 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 TOR2AQ5JU69 321 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 BPIFA4PQ86YQ2 179 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 PTX4Q96A99 478 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR51M1Q9H341 326 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 A0A1B0GW64 132 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 SRSF1Q07955 248 aaKnown RBP eCLIP4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 FOXL2NBQ6ZUU3 175 aa4.57□□□□□ -1.68
CDC42BPA-209ENST00000448940 SPCS3P61009 180 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 CX3CL1P78423 397 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 SURF2Q15527 256 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 DEFB135Q30KP9 77 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM95Q3KNT9 176 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM128Q5BJH2 165 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 Q6ZR03 302 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 ANKRD29Q8N6D5 301 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 CD177Q8N6Q3 437 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM229BQ8NBD8 167 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 PPIL3Q9H2H8 161 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGKV1D-17A0A075B6S4 117 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 RBFOX3A6NFN3 312 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 IGKV1D-12P01611 117 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 P2RY4P51582 365 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM97Q5BJF2 176 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 CHCHD5Q9BSY4 110 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 RSG1Q9BU20 258 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 SLC25A32Q9H2D1 315 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF735P0CB33 412 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 RNF125Q96EQ8 232 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 PAXXQ9BUH6 204 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF257Q9Y2Q1 563 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 DSCAML1Q8TD84 2053 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 SAA2-SAA4A0A096LPE2 208 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 IL4P05112 153 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 CTSDP07339 412 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 SAA2P0DJI9 122 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 RPS19P39019 145 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 C15orf32Q32M92 178 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 C1orf100Q5SVJ3 147 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 TEX36Q5VZQ5 186 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 MIEN1Q9BRT3 115 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 LPAR5Q9H1C0 372 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 MGAM2Q2M2H8 2515 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 A0A1B0GTI1 187 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF324O75467 553 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 SRIP30626 198 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 DLX1P56177 255 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM258P61165 79 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 FAM53AQ6NSI3 398 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM144Q7Z5S9 345 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 KCNRGQ8N5I3 272 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF331Q9NQX6 463 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 CENPVL3A0A0U1RRI6 287 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 MARCH11A6NNE9 402 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 RNASE4P34096 147 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 PLPPR1Q8TBJ4 325 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 RNF138Q8WVD3 245 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 C12orf57Q99622 126 aa4.56□□□□□ -1.68
CDC42BPA-209ENST00000448940 ITPR3Q14573 2671 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 SYNGR2O43760 224 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 MORN2Q502X0 79 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 S100A7L2Q5SY68 101 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 NPVFQ9HCQ7 196 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 CD8AP01732 235 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 TYMSP04818 313 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 RNF224P0DH78 156 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 LMO4P61968 165 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 ELOBQ15370 118 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 UQCC3Q6UW78 93 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF600Q6ZNG1 722 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR5AN1Q8NGI8 311 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 MRAP2Q96G30 205 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 TBX15Q96SF7 602 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 ZNF747Q9BV97 191 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 TM2D2Q9BX73 214 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 PKIGQ9Y2B9 76 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 INSP01308 110 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 RNASE1P07998 156 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 HOGA1Q86XE5 327 aa4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 WDR61Q9GZS3 305 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-209ENST00000448940 IL36RNQ9UBH0 155 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms