RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CLEC7AQ9BXN2 247 aa15.4■□□□□ 0.06
SDCBP-204ENST00000447182 TNXAQ16473 311 aa15.39■□□□□ 0.05
SDCBP-204ENST00000447182 C8orf31Q8N9H6 132 aa15.39■□□□□ 0.05
SDCBP-204ENST00000447182 STXBP6Q8NFX7 210 aa15.39■□□□□ 0.05
SDCBP-204ENST00000447182 TXN2Q99757 166 aa15.39■□□□□ 0.05
SDCBP-204ENST00000447182 ALKBH7Q9BT30 221 aaPredicted RBP15.39■□□□□ 0.05
SDCBP-204ENST00000447182 KLF12Q9Y4X4 402 aa15.39■□□□□ 0.05
SDCBP-204ENST00000447182 IGLV2-23P01705 113 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 TNFRSF1AP19438 455 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 Q6ZN92 141 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 C22orf34Q6ZV56 151 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 LINC00311Q8N616 119 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 WNT10AQ9GZT5 417 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 A0A1B0GXF2 115 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 HIGD1CA8MV81 97 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 HSBP1O75506 76 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 CCL3L1P16619 93 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 HNRNPA3P51991 378 aaKnown RBP15.38■□□□□ 0.05
SDCBP-204ENST00000447182 ASPHD1Q5U4P2 390 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 TMEM200BQ69YZ2 307 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 LINC00305Q7Z4B0 112 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 ZCCHC24Q8N2G6 241 aaKnown RBP15.38■□□□□ 0.05
SDCBP-204ENST00000447182 TMEM186Q96B77 213 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 EPDR1Q9UM22 224 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 LAMTOR2Q9Y2Q5 125 aa15.38■□□□□ 0.05
SDCBP-204ENST00000447182 REG1BP48304 166 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 CYB5R2Q6BCY4 276 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 RBMXL3Q8N7X1 1067 aaKnown RBP15.37■□□□□ 0.05
SDCBP-204ENST00000447182 TNFRSF19Q9NS68 423 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 C20orf202A1L168 122 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 FAM181BA6NEQ2 426 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 TFPI2P48307 235 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 CCL8P80075 99 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 C10orf55Q5SWW7 151 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 IGFL3Q6UXB1 125 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 ZNF841Q6ZN19 808 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 OR8B3Q8NGG8 313 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 ST6GALNAC6Q969X2 333 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 OR8B2Q96RD0 313 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 MRPL36Q9P0J6 103 aaKnown RBP15.37■□□□□ 0.05
SDCBP-204ENST00000447182 WASHC3Q9Y3C0 194 aa15.37■□□□□ 0.05
SDCBP-204ENST00000447182 FCN3O75636 299 aa15.36■□□□□ 0.05
SDCBP-204ENST00000447182 FTH1P19P0C7X4 201 aa15.36■□□□□ 0.05
SDCBP-204ENST00000447182 CEACAM8P31997 349 aaPredicted RBP15.36■□□□□ 0.05
SDCBP-204ENST00000447182 CA7P43166 264 aa15.36■□□□□ 0.05
SDCBP-204ENST00000447182 UBE2G1P62253 170 aa15.36■□□□□ 0.05
SDCBP-204ENST00000447182 FAM27E3Q08E93 113 aa15.36■□□□□ 0.05
SDCBP-204ENST00000447182 PVRIGQ6DKI7 326 aa15.36■□□□□ 0.05
SDCBP-204ENST00000447182 OR10X1Q8NGY0 326 aa15.36■□□□□ 0.05
SDCBP-204ENST00000447182 PERPQ96FX8 193 aa15.36■□□□□ 0.05
SDCBP-204ENST00000447182 MRPS16Q9Y3D3 137 aaKnown RBP15.36■□□□□ 0.05
SDCBP-204ENST00000447182 NAV3Q8IVL0 2385 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 CRYGCP07315 174 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 ZNF137PP52743 207 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 PRR27Q6MZM9 219 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 STPG4Q8N801 248 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 MLST8Q9BVC4 326 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 VWC2LB2RUY7 222 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 M0R2Z0 102 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 GNG5P63218 68 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 ETFRF1Q6IPR1 90 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 EBLN2Q6P2I7 272 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 GPR82Q96P67 336 aa15.35■□□□□ 0.05
SDCBP-204ENST00000447182 A0A1W2PPI3 338 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 C17orf100A8MU93 164 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 SLC25A5P05141 298 aaKnown RBP15.34■□□□□ 0.05
SDCBP-204ENST00000447182 DIAPH2-AS1Q14236 149 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 CT83Q5H943 113 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 LCN12Q6JVE5 192 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 PRSS22Q9GZN4 317 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 ZFHX4Q86UP3 3567 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 TRAV9-2A0A087WT02 112 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 C2orf70A6NJV1 201 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 CORTO00230 105 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 IGHV3-48P01763 117 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 TSPOP30536 169 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 VMA21Q3ZAQ7 101 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 FAM162BQ5T6X4 162 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 C11orf42Q8N5U0 333 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 TRGV9Q99603 122 aa15.34■□□□□ 0.05
SDCBP-204ENST00000447182 SOX21Q9Y651 276 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-204ENST00000447182 C22orf46C9J442 243 aa15.33■□□□□ 0.04
SDCBP-204ENST00000447182 GPR6P46095 362 aaPredicted RBP15.33■□□□□ 0.04
SDCBP-204ENST00000447182 MRGPRG-AS1Q2M3A8 158 aa15.33■□□□□ 0.04
SDCBP-204ENST00000447182 IGF2-ASQ6U949 168 aa15.33■□□□□ 0.04
SDCBP-204ENST00000447182 SSBP4Q9BWG4 385 aaPredicted RBP15.33■□□□□ 0.04
SDCBP-204ENST00000447182 PGPA6NDG6 321 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 NDUFB8O95169 186 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 PLAUP00749 431 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 MC5RP33032 325 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 CAMPP49913 170 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 TMEM108Q6UXF1 575 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 ATOH7Q8N100 152 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 DEFB124Q8NES8 71 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 RPP21Q9H633 154 aaKnown RBP15.32■□□□□ 0.04
SDCBP-204ENST00000447182 ZNF492Q9P255 531 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 TNFRSF13BO14836 293 aaPredicted RBP15.32■□□□□ 0.04
SDCBP-204ENST00000447182 TOMM40O96008 361 aa15.32■□□□□ 0.04
SDCBP-204ENST00000447182 NBEAP1P0C6P0 100 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms