RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ZNF486Q96H40 463 aaPredicted RBP17.45■□□□□ 0.38
PMS1-214ENST00000446877 SEPSECSQ9HD40 501 aaKnown RBP17.45■□□□□ 0.38
PMS1-214ENST00000446877 FAM90A26D6RGX4 464 aa17.44■□□□□ 0.38
PMS1-214ENST00000446877 H3BMM0 161 aa17.44■□□□□ 0.38
PMS1-214ENST00000446877 PI3P19957 117 aa17.44■□□□□ 0.38
PMS1-214ENST00000446877 RNASE11Q8TAA1 199 aaKnown RBP17.44■□□□□ 0.38
PMS1-214ENST00000446877 TP53RKQ96S44 253 aa17.44■□□□□ 0.38
PMS1-214ENST00000446877 C3orf85A0A1B0GTC6 90 aa17.43■□□□□ 0.38
PMS1-214ENST00000446877 M0QYG6 137 aa17.43■□□□□ 0.38
PMS1-214ENST00000446877 NEU1Q99519 415 aa17.43■□□□□ 0.38
PMS1-214ENST00000446877 NRN1Q9NPD7 142 aa17.43■□□□□ 0.38
PMS1-214ENST00000446877 SMIM9A6NGZ8 99 aa17.42■□□□□ 0.38
PMS1-214ENST00000446877 CD74P04233 296 aa17.42■□□□□ 0.38
PMS1-214ENST00000446877 OR10J1P30954 320 aa17.42■□□□□ 0.38
PMS1-214ENST00000446877 HTR2BP41595 481 aa17.42■□□□□ 0.38
PMS1-214ENST00000446877 YPEL3P61236 119 aaPredicted RBP17.42■□□□□ 0.38
PMS1-214ENST00000446877 DHODHQ02127 395 aa17.42■□□□□ 0.38
PMS1-214ENST00000446877 ZNF705AQ6ZN79 300 aaPredicted RBP17.42■□□□□ 0.38
PMS1-214ENST00000446877 Q6ZR54 194 aa17.42■□□□□ 0.38
PMS1-214ENST00000446877 COMMD3Q9UBI1 195 aa17.42■□□□□ 0.38
PMS1-214ENST00000446877 IGLC1P0CG04 106 aa17.41■□□□□ 0.38
PMS1-214ENST00000446877 SLC25A4P12235 298 aa17.41■□□□□ 0.38
PMS1-214ENST00000446877 RND2P52198 227 aa17.41■□□□□ 0.38
PMS1-214ENST00000446877 BSXQ3C1V8 233 aa17.41■□□□□ 0.38
PMS1-214ENST00000446877 Q6ZRM9 215 aa17.41■□□□□ 0.38
PMS1-214ENST00000446877 ZNF575Q86XF7 245 aa17.41■□□□□ 0.38
PMS1-214ENST00000446877 COPZ2Q9P299 210 aa17.41■□□□□ 0.38
PMS1-214ENST00000446877 RFNGQ9Y644 331 aa17.41■□□□□ 0.38
PMS1-214ENST00000446877 HSPG2P98160 4391 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 IGHV3OR16-12A0A075B7B8 117 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 TEX48A0A1B0GUV7 120 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 GSTZ1O43708 216 aaPredicted RBP17.4■□□□□ 0.38
PMS1-214ENST00000446877 APOA1P02647 267 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 IL4P05112 153 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 HLA-DRB4P13762 266 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 SPCS3P61009 180 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 LSM3P62310 102 aaKnown RBP17.4■□□□□ 0.38
PMS1-214ENST00000446877 SP6Q3SY56 376 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 RNF212Q495C1 297 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 PRSS54Q6PEW0 395 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 SIGLEC15Q6ZMC9 328 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 HEYLQ9NQ87 328 aaPredicted RBP17.4■□□□□ 0.38
PMS1-214ENST00000446877 HLA-DRB4X5D2U9 266 aa17.4■□□□□ 0.38
PMS1-214ENST00000446877 ZNF705FA8MVS1 300 aaPredicted RBP17.39■□□□□ 0.37
PMS1-214ENST00000446877 ZNF705DP0CH99 300 aaPredicted RBP17.39■□□□□ 0.37
PMS1-214ENST00000446877 ZNF705BP0CI00 300 aaPredicted RBP17.39■□□□□ 0.37
PMS1-214ENST00000446877 NKX2-1P43699 371 aaPredicted RBP17.39■□□□□ 0.37
PMS1-214ENST00000446877 RNASE10Q5GAN6 216 aaKnown RBP17.39■□□□□ 0.37
PMS1-214ENST00000446877 C1orf134Q5TEV5 83 aa17.39■□□□□ 0.37
PMS1-214ENST00000446877 BUB3O43684 328 aa17.38■□□□□ 0.37
PMS1-214ENST00000446877 IGKV3-20P01619 116 aa17.38■□□□□ 0.37
PMS1-214ENST00000446877 HTN3P15516 51 aa17.38■□□□□ 0.37
PMS1-214ENST00000446877 USF2Q15853 346 aaPredicted RBP17.38■□□□□ 0.37
PMS1-214ENST00000446877 CCDC71LQ8N9Z2 235 aa17.38■□□□□ 0.37
PMS1-214ENST00000446877 RNASEH2CQ8TDP1 164 aaKnown RBP17.38■□□□□ 0.37
PMS1-214ENST00000446877 NIPSNAP3BQ9BS92 247 aa17.38■□□□□ 0.37
PMS1-214ENST00000446877 KRTAP4-5Q9BYR2 181 aa17.38■□□□□ 0.37
PMS1-214ENST00000446877 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.38■□□□□ 0.37
PMS1-214ENST00000446877 RD3LP0DJH9 198 aa17.37■□□□□ 0.37
PMS1-214ENST00000446877 ETFRF1Q6IPR1 90 aa17.37■□□□□ 0.37
PMS1-214ENST00000446877 OR52E5Q8NH55 327 aa17.37■□□□□ 0.37
PMS1-214ENST00000446877 ZFAND1Q8TCF1 268 aa17.37■□□□□ 0.37
PMS1-214ENST00000446877 DKK2Q9UBU2 259 aa17.37■□□□□ 0.37
PMS1-214ENST00000446877 A0A0G2JRQ6 117 aa17.36■□□□□ 0.37
PMS1-214ENST00000446877 FXYD7P58549 80 aa17.36■□□□□ 0.37
PMS1-214ENST00000446877 C2orf83Q53S99 150 aa17.36■□□□□ 0.37
PMS1-214ENST00000446877 FAM222AQ5U5X8 452 aa17.36■□□□□ 0.37
PMS1-214ENST00000446877 LHFPL1Q86WI0 220 aa17.36■□□□□ 0.37
PMS1-214ENST00000446877 FAM219AQ8IW50 185 aa17.36■□□□□ 0.37
PMS1-214ENST00000446877 ARRDC1Q8N5I2 433 aa17.36■□□□□ 0.37
PMS1-214ENST00000446877 PLA2G2EQ9NZK7 142 aa17.36■□□□□ 0.37
PMS1-214ENST00000446877 B3GALNT1O75752 331 aa17.35■□□□□ 0.37
PMS1-214ENST00000446877 TNFAIP8O95379 198 aa17.35■□□□□ 0.37
PMS1-214ENST00000446877 UCP1P25874 307 aa17.35■□□□□ 0.37
PMS1-214ENST00000446877 NPIPB3Q92617 1050 aa17.35■□□□□ 0.37
PMS1-214ENST00000446877 LINC00052Q96N35 136 aa17.35■□□□□ 0.37
PMS1-214ENST00000446877 PFDN2Q9UHV9 154 aa17.35■□□□□ 0.37
PMS1-214ENST00000446877 TOMM40O96008 361 aa17.34■□□□□ 0.37
PMS1-214ENST00000446877 ID1P41134 155 aa17.34■□□□□ 0.37
PMS1-214ENST00000446877 SLC24A4Q8NFF2 622 aa17.34■□□□□ 0.37
PMS1-214ENST00000446877 ACY3Q96HD9 319 aa17.34■□□□□ 0.37
PMS1-214ENST00000446877 CEBPZOSA8MTT3 80 aa17.33■□□□□ 0.36
PMS1-214ENST00000446877 ELK1P19419 428 aa17.33■□□□□ 0.36
PMS1-214ENST00000446877 NUP62P37198 522 aaPredicted RBP17.33■□□□□ 0.36
PMS1-214ENST00000446877 AARDQ4LEZ3 155 aa17.33■□□□□ 0.36
PMS1-214ENST00000446877 RNASE12Q5GAN4 147 aaKnown RBP17.33■□□□□ 0.36
PMS1-214ENST00000446877 GDF5OSQ5U4N7 250 aa17.33■□□□□ 0.36
PMS1-214ENST00000446877 NOXA1Q86UR1 476 aa17.33■□□□□ 0.36
PMS1-214ENST00000446877 KLK11Q9UBX7 282 aa17.33■□□□□ 0.36
PMS1-214ENST00000446877 GOLT1BQ9Y3E0 138 aa17.33■□□□□ 0.36
PMS1-214ENST00000446877 TMED3Q9Y3Q3 217 aa17.33■□□□□ 0.36
PMS1-214ENST00000446877 CD3DP04234 171 aa17.32■□□□□ 0.36
PMS1-214ENST00000446877 TBPP20226 339 aa17.32■□□□□ 0.36
PMS1-214ENST00000446877 OXA1LQ15070 435 aa17.32■□□□□ 0.36
PMS1-214ENST00000446877 FOXI2Q6ZQN5 318 aa17.32■□□□□ 0.36
PMS1-214ENST00000446877 OR4B1Q8NGF8 309 aa17.32■□□□□ 0.36
PMS1-214ENST00000446877 OR51G1Q8NGK1 321 aa17.32■□□□□ 0.36
PMS1-214ENST00000446877 TERB2Q8NHR7 220 aa17.32■□□□□ 0.36
PMS1-214ENST00000446877 YIPF6Q96EC8 236 aa17.32■□□□□ 0.36
PMS1-214ENST00000446877 SAV1Q9H4B6 383 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 298.2 ms