RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 MARCH11A6NNE9 402 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 H3BUA1 57 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 PROP1O75360 226 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 PGLYRP1O75594 196 aaPredicted RBP5.26□□□□□ -1.57
HDAC9-216ENST00000446646 SNAPC5O75971 98 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 KBTBD11O94819 623 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 FGF2P09038 288 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 CD7P09564 240 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 ANXA3P12429 323 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 F2RP25116 425 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 CNN1P51911 297 aaKnown RBP5.26□□□□□ -1.57
HDAC9-216ENST00000446646 AKR1C2P52895 323 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 CRIP2P52943 208 aaPredicted RBP5.26□□□□□ -1.57
HDAC9-216ENST00000446646 PIGPP57054 158 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 RND3P61587 244 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 RPL8P62917 257 aaKnown RBP5.26□□□□□ -1.57
HDAC9-216ENST00000446646 CX3CL1P78423 397 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 TATDN3Q17R31 274 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 ANKRD55Q3KP44 614 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 PHLDA2Q53GA4 152 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 AKIRIN2Q53H80 203 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 UNQ5815/PRO19632Q6UWF5 114 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 TBC1D26Q86UD7 250 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 OR4C16Q8NGL9 310 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 PHLDA1Q8WV24 401 aaPredicted RBP5.26□□□□□ -1.57
HDAC9-216ENST00000446646 CACNG8Q8WXS5 425 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 COMMD5Q9GZQ3 224 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 MAGT1Q9H0U3 335 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 FKBP11Q9NYL4 201 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 BET1LQ9NYM9 111 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 CACFD1Q9UGQ2 172 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 KLK5Q9Y337 293 aaPredicted RBP5.26□□□□□ -1.57
HDAC9-216ENST00000446646 V9GYH0 126 aa5.26□□□□□ -1.57
HDAC9-216ENST00000446646 A0A0G2JLM5 398 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 LOC102723971A0A1B0GUV8 181 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 FBLL1A6NHQ2 334 aaKnown RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 H0Y980 276 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 RBMXL2O75526 392 aaKnown RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 IGLV2-14P01704 120 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 IGLV2-23P01705 113 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 CTSDP07339 412 aaPredicted RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 RPL27AP46776 148 aaKnown RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 RPL30P62888 115 aaKnown RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 SRPXP78539 464 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 FGL1Q08830 312 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 EIF4EBP1Q13541 118 aaPredicted RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 ICAM4Q14773 271 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 RBMY1FQ15415 496 aaKnown RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 PSG3Q16557 428 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 PRSS8Q16651 343 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 TRIM16LQ309B1 348 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 LBHQ53QV2 105 aaPredicted RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 TMEM182Q6ZP80 229 aaPredicted RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 H2BFWTQ7Z2G1 175 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 HSD17B13Q7Z5P4 300 aaPredicted RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 LYG2Q86SG7 212 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 LHFPL1Q86WI0 220 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 OR13C8Q8NGS7 320 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 SRSF12Q8WXF0 261 aaKnown RBP5.25□□□□□ -1.57
HDAC9-216ENST00000446646 ST8SIA2Q92186 375 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 RITA1Q96K30 269 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 PDCD10Q9BUL8 212 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 ZNF355PQ9NSJ1 428 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 PTTG2Q9NZH5 202 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 PRNDQ9UKY0 176 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 KCNIP3Q9Y2W7 256 aa5.25□□□□□ -1.57
HDAC9-216ENST00000446646 A0A087WWL8 130 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 C3orf85A0A1B0GTC6 90 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 A0A1B0GW15 77 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 SMCO3A2RU48 225 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 MSGN1A6NI15 193 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 ZNF98A6NK75 572 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 ZNF785A8K8V0 405 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 S1PR2O95136 353 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 LGALS1P09382 135 aaKnown RBP5.24□□□□□ -1.57
HDAC9-216ENST00000446646 HLA-GP17693 338 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 LPAR6P43657 344 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 LINC00205P59089 165 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 TPPP2P59282 170 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 CD81P60033 236 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 NDPQ00604 133 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 DHODHQ02127 395 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 RBMS2Q15434 407 aaKnown RBP5.24□□□□□ -1.57
HDAC9-216ENST00000446646 ZNF79Q15937 498 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 POU2AF1Q16633 256 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 GUK1Q16774 197 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 CNPY1Q3B7I2 92 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 OR4A47Q6IF82 309 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 FAAP20Q6NZ36 180 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 FAM219AQ8IW50 185 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 PUSL1Q8N0Z8 303 aaKnown RBP5.24□□□□□ -1.57
HDAC9-216ENST00000446646 Q8N1X5 172 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 NECAP1Q8NC96 275 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 LFNGQ8NES3 379 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 OR2D3Q8NGH3 330 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 OR4D10Q8NGI6 311 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 OR51S1Q8NGJ8 323 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 OR4A16Q8NH70 328 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 LHFPL5Q8TAF8 219 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 TMEM167AQ8TBQ9 72 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms