RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.69□□□□□ -0.86
MSH6-204ENST00000445503 KIAA1549Q9HCM3 1950 aa9.69□□□□□ -0.86
MSH6-204ENST00000445503 IZUMO1RA6ND01 250 aa9.69□□□□□ -0.86
MSH6-204ENST00000445503 CD24P25063 80 aa9.69□□□□□ -0.86
MSH6-204ENST00000445503 ARL3P36405 182 aa9.69□□□□□ -0.86
MSH6-204ENST00000445503 DLX1P56177 255 aa9.69□□□□□ -0.86
MSH6-204ENST00000445503 C1orf174Q8IYL3 243 aa9.69□□□□□ -0.86
MSH6-204ENST00000445503 FAM168AQ92567 244 aa9.69□□□□□ -0.86
MSH6-204ENST00000445503 GSX1Q9H4S2 264 aaPredicted RBP9.69□□□□□ -0.86
MSH6-204ENST00000445503 S4R3C0 116 aa9.69□□□□□ -0.86
MSH6-204ENST00000445503 TRAV9-1A0A075B6T8 112 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 C16orf97H3BN30 126 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 NPSP0C0P6 89 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 INSIG2Q9Y5U4 225 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 A0A1W2PS18 150 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 IGHG3P01860 377 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 RPL27AP46776 148 aaKnown RBP9.68□□□□□ -0.86
MSH6-204ENST00000445503 NUDT10Q8NFP7 164 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 NUDT11Q96G61 164 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 NEU1Q99519 415 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
MSH6-204ENST00000445503 NBEAP1P0C6P0 100 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 RNASE2P10153 161 aaKnown RBP9.68□□□□□ -0.86
MSH6-204ENST00000445503 WT1P19544 449 aaPredicted RBP9.68□□□□□ -0.86
MSH6-204ENST00000445503 GFRALQ6UXV0 394 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 KIR3DL3Q8N743 410 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 OSR1Q8TAX0 266 aaPredicted RBP9.68□□□□□ -0.86
MSH6-204ENST00000445503 FAM222BQ8WU58 562 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 RPEQ96AT9 228 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 WASHC3Q9Y3C0 194 aa9.68□□□□□ -0.86
MSH6-204ENST00000445503 C19orf35Q6ZS72 473 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 OR4C5Q8NGB2 326 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 GAFA1Q96PS6 74 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 BMPR1BO00238 502 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 DLEU1O43261 78 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 CRYABP02511 175 aaKnown RBP9.67□□□□□ -0.86
MSH6-204ENST00000445503 SSBP2P81877 361 aaPredicted RBP9.67□□□□□ -0.86
MSH6-204ENST00000445503 EIF4EBP1Q13541 118 aaPredicted RBP9.67□□□□□ -0.86
MSH6-204ENST00000445503 MORN5Q5VZ52 161 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 ZNF596Q8TC21 504 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 MRPL32Q9BYC8 188 aaKnown RBP9.67□□□□□ -0.86
MSH6-204ENST00000445503 ADAMTS20P59510 1910 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 A8MWL6 223 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 CORTO00230 105 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 PPOXP50336 477 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 PRR20EP86478 221 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 PRR20CP86479 221 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 PRR20DP86480 221 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 PRR20BP86481 221 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 PRR20AP86496 221 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 ASCL2Q99929 193 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 MCRIP2Q9BUT9 160 aaKnown RBP9.67□□□□□ -0.86
MSH6-204ENST00000445503 C19orf24Q9BVV8 132 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 LAMTOR2Q9Y2Q5 125 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 DIAPH2-AS1Q14236 149 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 TPTE2P1Q5T6R2 138 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 GOLT1AQ6ZVE7 132 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 PRSS3P2Q8NHM4 247 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 NEUROG1Q92886 237 aa9.67□□□□□ -0.86
MSH6-204ENST00000445503 NAV3Q8IVL0 2385 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 IGKV1OR2-108A0A075B7D4 117 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 SELENOTP62341 195 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 SLAQ13239 276 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 LPAR2Q9HBW0 351 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 ONECUT1Q9UBC0 465 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 SH2D7A6NKC9 451 aaPredicted RBP9.66□□□□□ -0.86
MSH6-204ENST00000445503 CT45A10P0DMU9 189 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 C2orf83Q53S99 150 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 GRAMD2BQ96HH9 432 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 TNRC6AQ8NDV7 1962 aaKnown RBP9.66□□□□□ -0.86
MSH6-204ENST00000445503 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 MUC21A0A140T8X8 626 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 LOC389332A0A1B0GUA5 103 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 SCGB2A1O75556 95 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 FAM87AP0C7U9 286 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 MUC21Q5SSG8 566 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 FA2HQ7L5A8 372 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 TSKUQ8WUA8 353 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 LOXL4Q96JB6 756 aa9.66□□□□□ -0.86
MSH6-204ENST00000445503 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 SNAI2O43623 268 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 LEPROTL1O95214 131 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 Q8N7P7 452 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 NUP35Q8NFH5 326 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 CACNG8Q8WXS5 425 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 LINC00312Q9Y6C7 94 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 K7EQM0 130 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 IGLV1-44P01699 117 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 RASL11BQ9BPW5 248 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 CLEC7AQ9BXN2 247 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 NGBQ9NPG2 151 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 ZNF257Q9Y2Q1 563 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 TANC2Q9HCD6 1990 aa9.65□□□□□ -0.86
MSH6-204ENST00000445503 TRAV8-1A0A0A6YYK1 113 aa9.65□□□□□ -0.87
MSH6-204ENST00000445503 LYNX1G3V0Z9 82 aa9.65□□□□□ -0.87
MSH6-204ENST00000445503 CIDEAO60543 219 aa9.65□□□□□ -0.87
MSH6-204ENST00000445503 LYNX1P0DP58 116 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms