RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 IFNA4P05014 189 aa15.37■□□□□ 0.05
VSX1-206ENST00000444511 ZNF688P0C7X2 276 aa15.37■□□□□ 0.05
VSX1-206ENST00000444511 SLC25A4P12235 298 aa15.37■□□□□ 0.05
VSX1-206ENST00000444511 ALDH3B2P48448 385 aa15.37■□□□□ 0.05
VSX1-206ENST00000444511 EIF2B2P49770 351 aaKnown RBP15.37■□□□□ 0.05
VSX1-206ENST00000444511 RND2P52198 227 aa15.37■□□□□ 0.05
VSX1-206ENST00000444511 PRSS54Q6PEW0 395 aa15.37■□□□□ 0.05
VSX1-206ENST00000444511 Q8WTZ3 238 aa15.37■□□□□ 0.05
VSX1-206ENST00000444511 CTDSPLO15194 276 aa15.36■□□□□ 0.05
VSX1-206ENST00000444511 IGLC1P0CG04 106 aa15.36■□□□□ 0.05
VSX1-206ENST00000444511 OR10J1P30954 320 aa15.36■□□□□ 0.05
VSX1-206ENST00000444511 CLVS1Q8IUQ0 354 aaPredicted RBP15.36■□□□□ 0.05
VSX1-206ENST00000444511 OR51S1Q8NGJ8 323 aa15.36■□□□□ 0.05
VSX1-206ENST00000444511 RABL2AQ9UBK7 228 aaPredicted RBP15.36■□□□□ 0.05
VSX1-206ENST00000444511 RABL2BQ9UNT1 228 aa15.36■□□□□ 0.05
VSX1-206ENST00000444511 HELTA6NFD8 242 aa15.35■□□□□ 0.05
VSX1-206ENST00000444511 NXPH3O95157 252 aa15.35■□□□□ 0.05
VSX1-206ENST00000444511 TRPT1Q86TN4 253 aaKnown RBP15.35■□□□□ 0.05
VSX1-206ENST00000444511 CACFD1Q9UGQ2 172 aa15.35■□□□□ 0.05
VSX1-206ENST00000444511 KCNIP3Q9Y2W7 256 aa15.35■□□□□ 0.05
VSX1-206ENST00000444511 TMEM56-RWDD3S4R434 201 aa15.35■□□□□ 0.05
VSX1-206ENST00000444511 HNRNPCP07910 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
VSX1-206ENST00000444511 SULT1A3P0DMM9 295 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 SULT1A4P0DMN0 295 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 SPP1P10451 314 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 NPY1RP25929 384 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 YPEL3P61236 119 aaPredicted RBP15.34■□□□□ 0.05
VSX1-206ENST00000444511 DHRS2Q13268 280 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 TMEM41BQ5BJD5 291 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 LGALS9CQ6DKI2 356 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 ETFRF1Q6IPR1 90 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 MORN3Q6PF18 240 aaPredicted RBP15.34■□□□□ 0.05
VSX1-206ENST00000444511 NOXA1Q86UR1 476 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 DCANP1Q8TF63 244 aa15.34■□□□□ 0.05
VSX1-206ENST00000444511 CCDC59Q9P031 241 aaKnown RBP15.34■□□□□ 0.05
VSX1-206ENST00000444511 KNCNA6PVL3 124 aa15.33■□□□□ 0.04
VSX1-206ENST00000444511 AP2S1P53680 142 aaPredicted RBP15.33■□□□□ 0.04
VSX1-206ENST00000444511 RPP25LQ8N5L8 163 aaKnown RBP15.33■□□□□ 0.04
VSX1-206ENST00000444511 RAB2BQ8WUD1 216 aa15.33■□□□□ 0.04
VSX1-206ENST00000444511 IL22RA2Q969J5 263 aa15.33■□□□□ 0.04
VSX1-206ENST00000444511 SCGB3A2Q96PL1 93 aa15.33■□□□□ 0.04
VSX1-206ENST00000444511 SCP2D1Q9UJQ7 156 aa15.33■□□□□ 0.04
VSX1-206ENST00000444511 U3KQE9 123 aa15.33■□□□□ 0.04
VSX1-206ENST00000444511 ANKRD20A5PA0PJZ0 165 aa15.32■□□□□ 0.04
VSX1-206ENST00000444511 IL4P05112 153 aa15.32■□□□□ 0.04
VSX1-206ENST00000444511 ACTL10Q5JWF8 245 aa15.32■□□□□ 0.04
VSX1-206ENST00000444511 C16orf54Q6UWD8 224 aa15.32■□□□□ 0.04
VSX1-206ENST00000444511 DYNC2LI1Q8TCX1 351 aa15.32■□□□□ 0.04
VSX1-206ENST00000444511 TMEM170AQ8WVE7 144 aa15.32■□□□□ 0.04
VSX1-206ENST00000444511 NPIPB3Q92617 1050 aa15.32■□□□□ 0.04
VSX1-206ENST00000444511 ACY3Q96HD9 319 aa15.32■□□□□ 0.04
VSX1-206ENST00000444511 PRR13Q9NZ81 148 aa15.32■□□□□ 0.04
VSX1-206ENST00000444511 RSL24D1Q9UHA3 163 aaKnown RBP15.32■□□□□ 0.04
VSX1-206ENST00000444511 GSTZ1O43708 216 aaPredicted RBP15.31■□□□□ 0.04
VSX1-206ENST00000444511 DEDDO75618 318 aa15.31■□□□□ 0.04
VSX1-206ENST00000444511 IFNA10P01566 189 aa15.31■□□□□ 0.04
VSX1-206ENST00000444511 GIG44P09565 113 aaPredicted RBP15.31■□□□□ 0.04
VSX1-206ENST00000444511 NMSQ5H8A3 153 aa15.31■□□□□ 0.04
VSX1-206ENST00000444511 PSMG4Q5JS54 123 aa15.31■□□□□ 0.04
VSX1-206ENST00000444511 Q8NAQ8 132 aa15.31■□□□□ 0.04
VSX1-206ENST00000444511 C2CD4CQ8TF44 421 aa15.31■□□□□ 0.04
VSX1-206ENST00000444511 GLMPQ8WWB7 406 aa15.31■□□□□ 0.04
VSX1-206ENST00000444511 MCUBQ9NWR8 336 aa15.31■□□□□ 0.04
VSX1-206ENST00000444511 IGHV4-28A0A0C4DH34 117 aa15.3■□□□□ 0.04
VSX1-206ENST00000444511 RD3LP0DJH9 198 aa15.3■□□□□ 0.04
VSX1-206ENST00000444511 AKR1C4P17516 323 aa15.3■□□□□ 0.04
VSX1-206ENST00000444511 C4BPBP20851 252 aa15.3■□□□□ 0.04
VSX1-206ENST00000444511 TMBIM6P55061 237 aa15.3■□□□□ 0.04
VSX1-206ENST00000444511 USF2Q15853 346 aaPredicted RBP15.3■□□□□ 0.04
VSX1-206ENST00000444511 BCL7BQ9BQE9 202 aa15.3■□□□□ 0.04
VSX1-206ENST00000444511 TOMM40O96008 361 aa15.29■□□□□ 0.04
VSX1-206ENST00000444511 MIFP14174 115 aa15.29■□□□□ 0.04
VSX1-206ENST00000444511 CCR6P51684 374 aa15.29■□□□□ 0.04
VSX1-206ENST00000444511 SMCO1Q147U7 214 aa15.29■□□□□ 0.04
VSX1-206ENST00000444511 DTD1Q8TEA8 209 aa15.29■□□□□ 0.04
VSX1-206ENST00000444511 HRH4Q9H3N8 390 aa15.29■□□□□ 0.04
VSX1-206ENST00000444511 U3KQ87 197 aa15.29■□□□□ 0.04
VSX1-206ENST00000444511 A0A0B4J2A0 478 aa15.28■□□□□ 0.04
VSX1-206ENST00000444511 NOL3O60936 208 aaKnown RBP15.28■□□□□ 0.04
VSX1-206ENST00000444511 TCTAP57738 103 aa15.28■□□□□ 0.04
VSX1-206ENST00000444511 SNRPD3P62318 126 aaKnown RBP15.28■□□□□ 0.04
VSX1-206ENST00000444511 LYZL2Q7Z4W2 148 aa15.28■□□□□ 0.04
VSX1-206ENST00000444511 LGI3Q8N145 548 aa15.28■□□□□ 0.04
VSX1-206ENST00000444511 RAB40CQ96S21 281 aa15.28■□□□□ 0.04
VSX1-206ENST00000444511 CLEC5AQ9NY25 188 aa15.28■□□□□ 0.04
VSX1-206ENST00000444511 HSPB7Q9UBY9 170 aa15.28■□□□□ 0.04
VSX1-206ENST00000444511 SHPKQ9UHJ6 478 aa15.28■□□□□ 0.04
VSX1-206ENST00000444511 ZNF705EA8MWA4 302 aaPredicted RBP15.27■□□□□ 0.04
VSX1-206ENST00000444511 C11orf94C9JXX5 98 aa15.27■□□□□ 0.04
VSX1-206ENST00000444511 FAM90A26D6RGX4 464 aa15.27■□□□□ 0.04
VSX1-206ENST00000444511 RBMY1A1P0DJD3 496 aaKnown RBP15.27■□□□□ 0.04
VSX1-206ENST00000444511 RBMY1CP0DJD4 496 aa15.27■□□□□ 0.04
VSX1-206ENST00000444511 ANXA3P12429 323 aa15.27■□□□□ 0.04
VSX1-206ENST00000444511 SRPXP78539 464 aa15.27■□□□□ 0.04
VSX1-206ENST00000444511 RBMY1FQ15415 496 aaKnown RBP15.27■□□□□ 0.04
VSX1-206ENST00000444511 CENPSQ8N2Z9 138 aa15.27■□□□□ 0.04
VSX1-206ENST00000444511 RBKSQ9H477 322 aa15.27■□□□□ 0.04
VSX1-206ENST00000444511 NRN1Q9NPD7 142 aa15.27■□□□□ 0.04
VSX1-206ENST00000444511 FABP12A6NFH5 140 aa15.26■□□□□ 0.03
VSX1-206ENST00000444511 IGLL5B9A064 214 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms