RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 EBLN2Q6P2I7 272 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 FAM231DQ6ZW35 169 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 MCRIP2Q9BUT9 160 aaKnown RBP4.28□□□□□ -1.72
SCN11A-202ENST00000444237 C12orf49Q9H741 205 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 OTORQ9NRC9 128 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 GGTLC3B5MD39 225 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 SMIM10L1P0DMW3 83 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 C12orf74Q32Q52 190 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 ORMDL2Q53FV1 153 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 S100A7L2Q5SY68 101 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 TEN1Q86WV5 123 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 SMIM10Q96HG1 83 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 SCN2AQ99250 2005 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 SCRT1Q9BWW7 348 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 FABP5P3A8MUU1 101 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 IGLL5B9A064 214 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 NDUFC2O95298 119 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 LINC00271P0C7V0 271 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 CTRLP40313 264 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 C10orf128Q5T292 105 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 DGAT2L7PQ6IED9 249 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 C11orf52Q96A22 123 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 PTH2Q96A98 100 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 KIR2DL4Q99706 377 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 WFDC2Q14508 124 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 AMTNQ6UX39 209 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 Q6ZUT4 128 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 OR11H6Q8NGC7 330 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 SPATA25Q9BR10 227 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 PRDM14Q9GZV8 571 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 C1RLQ9NZP8 487 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 PDCD11Q14690 1871 aaKnown RBP4.27□□□□□ -1.73
SCN11A-202ENST00000444237 SPTBP11277 2137 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 NPIPB6E9PJ23 425 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 SLC25A20O43772 301 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 RPL32P62910 135 aaKnown RBP4.27□□□□□ -1.73
SCN11A-202ENST00000444237 TMEM196Q5HYL7 178 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 Q6ZS49 121 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 CXorf67Q86X51 503 aaPredicted RBP4.27□□□□□ -1.73
SCN11A-202ENST00000444237 GCSAMQ8N6F7 178 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 ZNF501Q96CX3 271 aaPredicted RBP4.27□□□□□ -1.73
SCN11A-202ENST00000444237 IDI2-AS1Q9NZ38 188 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 PILRAQ9UKJ1 303 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 PATJQ8NI35 1801 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 TDRD15B5MCY1 1934 aaKnown RBP4.27□□□□□ -1.73
SCN11A-202ENST00000444237 C17orf98A8MV24 154 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 D6R8Y8 96 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 K7ERJ3 54 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 LMO1P25800 156 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 GLRXP35754 106 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 RPL11P62913 178 aaKnown RBP4.27□□□□□ -1.73
SCN11A-202ENST00000444237 PSG4Q00888 419 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 ATP5G2Q06055 141 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 Q9H3A6 140 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 NYNRINQ9P2P1 1898 aaKnown RBP4.27□□□□□ -1.73
SCN11A-202ENST00000444237 NPIPB11E5RHQ5 1161 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 H7C1H1 209 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 FAM106CPP0CH98 169 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 FAM106AQ4KMX7 169 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 AMN1Q8IY45 258 aa4.27□□□□□ -1.73
SCN11A-202ENST00000444237 A0A1W2PPI3 338 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 SYNGR3O43761 229 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 ZIC3O60481 467 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 CELA2BP08218 269 aaPredicted RBP4.26□□□□□ -1.73
SCN11A-202ENST00000444237 UTF1Q5T230 341 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 DEFB124Q8NES8 71 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 DECR2Q9NUI1 292 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 FZR1Q9UM11 496 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 ARID2Q68CP9 1835 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 H0Y8X5 98 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 LGALS1P09382 135 aaKnown RBP4.26□□□□□ -1.73
SCN11A-202ENST00000444237 PAX9P55771 341 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
SCN11A-202ENST00000444237 GNG5P63218 68 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 TMEM78Q5T7P6 136 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 LINC01545Q5VT33 79 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 CENPVQ7Z7K6 275 aaPredicted RBP4.26□□□□□ -1.73
SCN11A-202ENST00000444237 ZNF114Q8NC26 417 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 NPIPB3Q92617 1050 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 HIGD1BQ9P298 99 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 M0R2P5 195 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 MGST3O14880 152 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 NPYP01303 97 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 IGKV1-5P01602 117 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 ZNF138P52744 262 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 LAGE3Q14657 143 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 VWC2Q2TAL6 325 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 FAM53AQ6NSI3 398 aaPredicted RBP4.26□□□□□ -1.73
SCN11A-202ENST00000444237 DEFB108BQ8NET1 73 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 FSCN3Q9NQT6 498 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 ZNF492Q9P255 531 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 SCN10AQ9Y5Y9 1956 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 IGHG4P01861 327 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 ACYP1P07311 99 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 PPIFP30405 207 aaKnown RBP4.26□□□□□ -1.73
SCN11A-202ENST00000444237 IGLV3-21P80748 117 aaPredicted RBP4.26□□□□□ -1.73
SCN11A-202ENST00000444237 ODF1Q14990 250 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 TMEM30BQ3MIR4 351 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 IGHV3-13P01766 116 aa4.26□□□□□ -1.73
SCN11A-202ENST00000444237 SPATA31B1PQ5VZV4 182 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms