RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 C12orf45Q8N5I9 185 aaPredicted RBP10.5□□□□□ -0.73
TREX1-202ENST00000444177 DEFB125Q8N687 156 aa10.5□□□□□ -0.73
TREX1-202ENST00000444177 ZNF414Q96IQ9 312 aa10.5□□□□□ -0.73
TREX1-202ENST00000444177 SEC22CQ9BRL7 303 aa10.5□□□□□ -0.73
TREX1-202ENST00000444177 HIPK2Q9H2X6 1198 aa10.5□□□□□ -0.73
TREX1-202ENST00000444177 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
TREX1-202ENST00000444177 CSMD3Q7Z407 3707 aa10.5□□□□□ -0.73
TREX1-202ENST00000444177 IGHV3-49A0A0A0MS15 119 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 OR11H12B2RN74 326 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 SCGB2A1O75556 95 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 MED6O75586 246 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 MLANAQ16655 118 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 C2orf83Q53S99 150 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 LAMTOR1Q6IAA8 161 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 NOXA1Q86UR1 476 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 DTD1Q8TEA8 209 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 RBKSQ9H477 322 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 SRD5A3Q9H8P0 318 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 MRPL36Q9P0J6 103 aaKnown RBP10.49□□□□□ -0.73
TREX1-202ENST00000444177 SACSQ9NZJ4 4579 aa10.49□□□□□ -0.73
TREX1-202ENST00000444177 STARD9Q9P2P6 4700 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 IGHV7-4-1A0A0J9YVY3 117 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 RBMY1BA6NDE4 496 aaKnown RBP10.48□□□□□ -0.73
TREX1-202ENST00000444177 RBMY1EA6NEQ0 496 aaKnown RBP10.48□□□□□ -0.73
TREX1-202ENST00000444177 CLN5O75503 358 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 TMEM50AO95807 157 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 IFNA10P01566 189 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 RBMY1DP0C7P1 496 aaKnown RBP10.48□□□□□ -0.73
TREX1-202ENST00000444177 ZNF600Q6ZNG1 722 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 TMEM116Q8NCL8 245 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 OR4D5Q8NGN0 318 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 OR4X1Q8NH49 305 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 RNASEH2CQ8TDP1 164 aaKnown RBP10.48□□□□□ -0.73
TREX1-202ENST00000444177 OR10C1Q96KK4 312 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 SPAG8Q99932 426 aaPredicted RBP10.48□□□□□ -0.73
TREX1-202ENST00000444177 GINS3Q9BRX5 216 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 RETNQ9HD89 108 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 PUS1Q9Y606 427 aaKnown RBP eCLIP10.48□□□□□ -0.73
TREX1-202ENST00000444177 U3KQ87 197 aa10.48□□□□□ -0.73
TREX1-202ENST00000444177 IGHV3OR16-13A0A075B7E8 117 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 TRAV14DV4A0A0A6YYC5 116 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 IGHV3-74A0A0B4J1X5 117 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 TSPAN4O14817 238 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 RND2P52198 227 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 ID3Q02535 119 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 RGS21Q2M5E4 152 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 IAH1Q2TAA2 248 aaPredicted RBP10.47□□□□□ -0.73
TREX1-202ENST00000444177 TOMM20LQ6UXN7 152 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 TMEM170AQ8WVE7 144 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 CIB3Q96Q77 187 aaPredicted RBP10.47□□□□□ -0.73
TREX1-202ENST00000444177 RHPN1-AS1Q9BWJ2 59 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 SMPXQ9UHP9 88 aa10.47□□□□□ -0.73
TREX1-202ENST00000444177 LCE6AA0A183 80 aa10.46□□□□□ -0.73
TREX1-202ENST00000444177 C7orf66A4D0T2 115 aa10.46□□□□□ -0.73
TREX1-202ENST00000444177 MPTX1A8MV57 137 aa10.46□□□□□ -0.73
TREX1-202ENST00000444177 CHEK1O14757 476 aa10.46□□□□□ -0.73
TREX1-202ENST00000444177 SYNGR2O43760 224 aa10.46□□□□□ -0.73
TREX1-202ENST00000444177 IAPPP10997 89 aa10.46□□□□□ -0.73
TREX1-202ENST00000444177 ZBTB8BQ8NAP8 495 aaPredicted RBP10.46□□□□□ -0.73
TREX1-202ENST00000444177 RNF2Q99496 336 aa10.46□□□□□ -0.73
TREX1-202ENST00000444177 ZFAND3Q9H8U3 227 aa10.46□□□□□ -0.73
TREX1-202ENST00000444177 UBQLN2Q9UHD9 624 aa10.46□□□□□ -0.73
TREX1-202ENST00000444177 IGKV3-7A0A075B6H7 116 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 TRAV30A0A087WSZ9 112 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 OR4C46A6NHA9 309 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 SLC25A4P12235 298 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 BMI1P35226 326 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 NKX2-1P43699 371 aaPredicted RBP10.45□□□□□ -0.74
TREX1-202ENST00000444177 RPP30P78346 268 aaKnown RBP10.45□□□□□ -0.74
TREX1-202ENST00000444177 TIGITQ495A1 244 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 ETFRF1Q6IPR1 90 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 PRSS54Q6PEW0 395 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 GSG1LQ6UXU4 331 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 OR1S2Q8NGQ3 325 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 ACY3Q96HD9 319 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 FAM110AQ9BQ89 295 aa10.45□□□□□ -0.74
TREX1-202ENST00000444177 IGHV3-66A0A0C4DH42 116 aa10.44□□□□□ -0.74
TREX1-202ENST00000444177 IFNA4P05014 189 aa10.44□□□□□ -0.74
TREX1-202ENST00000444177 IGLC1P0CG04 106 aa10.44□□□□□ -0.74
TREX1-202ENST00000444177 OR10J1P30954 320 aa10.44□□□□□ -0.74
TREX1-202ENST00000444177 TFPI2P48307 235 aa10.44□□□□□ -0.74
TREX1-202ENST00000444177 ST8SIA2Q92186 375 aa10.44□□□□□ -0.74
TREX1-202ENST00000444177 C2orf50Q96LR7 162 aa10.44□□□□□ -0.74
TREX1-202ENST00000444177 PAIP2BQ9ULR5 123 aaKnown RBP10.44□□□□□ -0.74
TREX1-202ENST00000444177 C5orf51A6NDU8 294 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 WRBO00258 174 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 CCSO14618 274 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 IGKV1-17P01599 117 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 APOHP02749 345 aaPredicted RBP10.43□□□□□ -0.74
TREX1-202ENST00000444177 TAS2R30P59541 319 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 OXA1LQ15070 435 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 TCF24Q7RTU0 167 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 NPIPB3Q92617 1050 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 METTL26Q96S19 204 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 MAGT1Q9H0U3 335 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 TMEM231Q9H6L2 316 aa10.43□□□□□ -0.74
TREX1-202ENST00000444177 NPPCP23582 126 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 RAB11AP62491 216 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 IL15RAQ13261 267 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 ODF3L2Q3SX64 289 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms