RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 ZNF415Q09FC8 603 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 COLCA1Q6ZS62 124 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 ORAOV1Q8WV07 137 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 GPHA2Q96T91 129 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 IGHV3-49A0A0A0MS15 119 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 TRAV2A0A0B4J234 112 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 PRR32B1ATL7 298 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 TGFAP01135 160 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 MESP2Q0VG99 397 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 PLPPR1Q8TBJ4 325 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 IFI27L1Q96BM0 104 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 METRNQ9UJH8 293 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 ZNHIT1O43257 154 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 CRYBA2P53672 197 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 IGLV3-21P80748 117 aaPredicted RBP5.6□□□□□ -1.51
USP46-201ENST00000441222 SRSF4Q08170 494 aaKnown RBP5.6□□□□□ -1.51
USP46-201ENST00000441222 VWA8A3KMH1 1905 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 IGHV2OR16-5A0A0B4J2B6 119 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 IGHV3-66A0A0C4DH42 116 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 EGR1P18146 543 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 TMEM249Q2WGJ8 235 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 SPSB3Q6PJ21 355 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 CHCHD5Q9BSY4 110 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 TMEM133Q9H2Q1 129 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 KLF12Q9Y4X4 402 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 H3BUT2 72 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 SMAD7O15105 426 aaKnown RBP5.6□□□□□ -1.51
USP46-201ENST00000441222 PAX8Q06710 450 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 SRSF7Q16629 238 aaKnown RBP eCLIP5.6□□□□□ -1.51
USP46-201ENST00000441222 UBE2DNLQ8IWF7 75 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 MEGF9Q9H1U4 602 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 TMEM242Q9NWH2 141 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 IGKV1D-42A0A075B6H8 117 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 PIN1P1O15428 100 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 FAM19A2Q8N3H0 131 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 IGHV3OR16-13A0A075B7E8 117 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 IGHV3-74A0A0B4J1X5 117 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 A0A0G2JK05 382 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 WNT2P09544 360 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 RPL23P62829 140 aaKnown RBP5.59□□□□□ -1.51
USP46-201ENST00000441222 CSRP2Q16527 193 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 FBLN7Q53RD9 439 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 SAMD5Q5TGI4 173 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 SPSB2Q99619 263 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 DENND4AQ7Z401 1863 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.51
USP46-201ENST00000441222 RPL36AP83881 106 aaKnown RBP5.59□□□□□ -1.51
USP46-201ENST00000441222 IFITM3Q01628 133 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 TFF3Q07654 80 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 OR10W1Q8NGF6 305 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 LINC01560Q8TB33 94 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 RPL36ALQ969Q0 106 aaKnown RBP5.59□□□□□ -1.51
USP46-201ENST00000441222 NDUFAF3Q9BU61 184 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 MED13Q9UHV7 2174 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 IGKV3D-20A0A0C4DH25 116 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 ITGB1BP1O14713 200 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 IGHV3-23P01764 117 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 SIGLEC15Q6ZMC9 328 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 SLC25A48Q6ZT89 311 aaKnown RBP5.59□□□□□ -1.51
USP46-201ENST00000441222 LAMTOR3Q9UHA4 124 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 C17orf98A8MV24 154 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 A8MXK9 166 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 VWC2LB2RUY7 222 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 EIF4EBP2Q13542 120 aaPredicted RBP5.59□□□□□ -1.51
USP46-201ENST00000441222 RASL10AQ92737 203 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 GSN-AS1Q9NRJ2 163 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 PSG8Q9UQ74 426 aa5.59□□□□□ -1.51
USP46-201ENST00000441222 ZNF497Q6ZNH5 498 aa5.59□□□□□ -1.52
USP46-201ENST00000441222 NRTNQ99748 197 aa5.59□□□□□ -1.52
USP46-201ENST00000441222 TANC2Q9HCD6 1990 aa5.59□□□□□ -1.52
USP46-201ENST00000441222 IGHV3OR16-10A0A075B7F0 116 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 TRBV7-1A0A0A6YYK4 115 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 OOSP1A8MZH6 123 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 ERVH48-1M5A8F1 160 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 LEPROTO15243 131 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 ZNF525Q8N782 197 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 TSKUQ8WUA8 353 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 SLC25A28Q96A46 364 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 ARHGAP21Q5T5U3 1957 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 SERF1AO75920 110 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 OR9G9P0C7N8 305 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 ZP1P60852 638 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 GATD1Q8NB37 220 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 ZNF479Q96JC4 524 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 FNDC4Q9H6D8 234 aaPredicted RBP5.58□□□□□ -1.52
USP46-201ENST00000441222 PROB1E7EW31 1015 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 PSG7Q13046 419 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 MORN2Q502X0 79 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 MIR17HGQ75NE6 70 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 TRBV6-7A0A0A0MS04 114 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 LOC101059948A0A1B0GTJ6 334 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 PAX4O43316 350 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 PPP1R32Q7Z5V6 425 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 CHCHD2Q9Y6H1 151 aaPredicted RBP5.58□□□□□ -1.52
USP46-201ENST00000441222 MGAMO43451 1857 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 VCYO14598 125 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 UMODP07911 640 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 LINC00477Q96M19 166 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 PSCAO43653 123 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 ATP5G3P48201 142 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms